Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc447g00003 | ATGAAGTTTGGTTTGGATTTGAGAACTGGTCTTAATAGGAAATTAACAGCTTGGAAAAGTGTTGATGATCCTTCTCCTGGGGATTTCTCTTTTAGCATGGTTTTACACAATTACCCTGATGCATACATGATCAAGGATGGGAAAAAGTACTATAGGAGTGGACCATGGAATGGCCTTCACTCAAGTGGTTCACCACAAGTAAGATCCAACCCCATTTATGACTACAAGTTTGTTTTCAACAAGGATGAACTTTACTACACCTACAGCATGAAGAACTCTTCTTCTATCTCAAGGATTGTGCTGGATGGAACAAACTATGTTCGGCGGCGATATATGTGGATTGAATCTGACAAAAGATGGCAGACATACACATCAGTGCCATTGGACTTGTGTGACACTTATGCAATTTGTGGAGCTTATGGAAGTTGTGTTATCACAGATTCACCAGTTTGTCAATGTTTGAAAGGGTTCAAGGCCAAGTCACCTAAAGCATGGAACTCAATGGATTGGTCTCATGGATGTGTGAGGATCAAGCCACTGAGCTGCAAAGACAAAGAAAAAGATGGATTTGCGAAGATATCCGGACTAAAAGTACCTGATACTACACATAGTTGGTTGGATCAGACAATTGGGTTGAAAGAATGTAGAGCAAAGTGCCTGAACAATTGTTCTTGCATGGCTTATGTAAATTCAGATGTTAGAGGAAAAGGAAGTGGTTGTGCCTTGAGGTTTAGTGATCTAATTGACCTCAGACAACTATCAGCTGGAGGGCAGGACCTATATGTTAGAATGGATGCTTCAGAGTTAGCAGAGGTCGAAGTTAGCCACAAGAAGGATCGAGTCCTAGTGGCAGTAATAATTCCTCTGGCCATAGCAGCAGTTTCTGGCATACTCATATCCGGTGGGTGCTATAAAAAGAAGTCAAGAAAAAAGGTTAAAGAGAAATTAAGCTTTGATATGCAAGGAGATCAAAACAGTAGAATGTTAGTGGATGATATGGATCTGCCAGTTTTTGGCTTGTCAACAATTGCCAAGGCCACTAGCAACTTTGCAATCATGAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAATGCTAGAAGATGGGCCAGAAATTGCAGTGACGAGACTTTCAGCAAGCTCAGGACAAGGAATTAATGAATTCAAGAATGAAGTAAAATTAATTGCGAAACTTCAACACCGTAATCTTGTAAAGCTTCTAGGATGTTGCATTGAAGAAGAGGAAAAAATGTTGGTTTATGAATACATGCCTAACAGTAGTTTGGACTCCTTTATTTTTGATCAGCAGAGAAGTGAATTACTAGATTGGTTAAAGCGTTTCAATATTATATGTGGAATTGCTAAGGGTCTTCTCTATCTTCATCAAGACTCCAGACCGAGGATTATTCACAGAGATCCCAAAGCAAGTAATGTTTTACTTGATAATGAGTTAAATCCTAAGATTTCAGATTTCGGCATGGCTGGCATTTTTGGGGGAGATCAAAATGAAGTAAACACAAAGAGAATAGTTGGGGCTTATGGTTACATGGCACCGGAATATGCTAGTGATGGGCACTTTTCAGTGAAATCTGATGTTTTTAGCTTCGGTGTTTTGTTGCTGGAGATCATATCTGGGAAGAGAAGTAGAGGATACTACAATCAAAACACAAGCCACAATCTCATTGGCCATGCATGGAAACTGTGGAAGGAAGGAATGCCACTAGAACTAGTTGAAACAAGGCCAGGAGATTGTTCTTTTCAATCACAAATATTGCACTGCATTCATGTTAGTCTCTTGTGTGTTCAACATAATCCAGAGGACAGGCCTGGAATGTCATCTGTTCTGCTAATGTTAGTGAGTGAGTTTGAACTGCCTGAGCCAAAACAGCCAGGTTTCTTTGCAAAGGATTCAGGGGAAGCTGATTCATCCACAAGTAACATGCAACTGAGTTCAACAAGTGAAATAACCATTACCCTTTTAGAAGCCAGATGA | 2001 | 0.4013 | MKFGLDLRTGLNRKLTAWKSVDDPSPGDFSFSMVLHNYPDAYMIKDGKKYYRSGPWNGLHSSGSPQVRSNPIYDYKFVFNKDELYYTYSMKNSSSISRIVLDGTNYVRRRYMWIESDKRWQTYTSVPLDLCDTYAICGAYGSCVITDSPVCQCLKGFKAKSPKAWNSMDWSHGCVRIKPLSCKDKEKDGFAKISGLKVPDTTHSWLDQTIGLKECRAKCLNNCSCMAYVNSDVRGKGSGCALRFSDLIDLRQLSAGGQDLYVRMDASELAEVEVSHKKDRVLVAVIIPLAIAAVSGILISGGCYKKKSRKKVKEKLSFDMQGDQNSRMLVDDMDLPVFGLSTIAKATSNFAIMNKIGEGGFGPVYKGMLEDGPEIAVTRLSASSGQGINEFKNEVKLIAKLQHRNLVKLLGCCIEEEEKMLVYEYMPNSSLDSFIFDQQRSELLDWLKRFNIICGIAKGLLYLHQDSRPRIIHRDPKASNVLLDNELNPKISDFGMAGIFGGDQNEVNTKRIVGAYGYMAPEYASDGHFSVKSDVFSFGVLLLEIISGKRSRGYYNQNTSHNLIGHAWKLWKEGMPLELVETRPGDCSFQSQILHCIHVSLLCVQHNPEDRPGMSSVLLMLVSEFELPEPKQPGFFAKDSGEADSSTSNMQLSSTSEITITLLEAR | 666 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc447g00003 | 666 | ProSiteProfiles | EGF-like domain profile. | 127 | 163 | IPR000742 | - | |
Stsc447g00003 | 666 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 426 | 629 | - | - | |
Stsc447g00003 | 666 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 314 | 425 | - | - | |
Stsc447g00003 | 666 | Pfam | S-locus glycoprotein domain | 51 | 160 | IPR000858 | GO:0048544 | |
Stsc447g00003 | 666 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 1 | 611 | - | - | |
Stsc447g00003 | 666 | ProSiteProfiles | PAN/Apple domain profile. | 182 | 266 | IPR003609 | - | |
Stsc447g00003 | 666 | Gene3D | Transferase(Phosphotransferase) domain 1 | 426 | 628 | - | - | |
Stsc447g00003 | 666 | CDD | PAN_AP_plant | 179 | 263 | - | - | |
Stsc447g00003 | 666 | Pfam | Domain of unknown function (DUF3403) | 625 | 666 | IPR021820 | GO:0004674 | |
Stsc447g00003 | 666 | Gene3D | Hepatocyte Growth Factor | 182 | 262 | - | - | |
Stsc447g00003 | 666 | Pfam | Protein tyrosine and serine/threonine kinase | 352 | 618 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc447g00003 | 666 | Gene3D | Phosphorylase Kinase; domain 1 | 310 | 425 | - | - | |
Stsc447g00003 | 666 | SUPERFAMILY | Protein kinase-like (PK-like) | 332 | 621 | IPR011009 | - | |
Stsc447g00003 | 666 | ProSiteProfiles | Protein kinase domain profile. | 350 | 626 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc447g00003 | 666 | Pfam | PAN-like domain | 182 | 250 | IPR003609 | - | |
Stsc447g00003 | 666 | CDD | STKc_IRAK | 356 | 621 | - | - | |
Stsc447g00003 | 666 | SMART | ntp_6 | 185 | 264 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc447g00003 | Stsc-Chr447 | 24424 | 27406 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc447g00003 | 275 | 635 | Receptor kinase-like Gene Family | AT4G23230 | 51.381 | 1.01e-124 | 382 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc447g00003 | PK_Tyr_Ser-Thr | 5.4e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc447g00003 | - | - | gmx:100778155 | 1056.2 |