Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc445g00007 ATGGATGCCACGAAGAGCAATGCGTGCATACTCAATTTGGGGCTTCTGCTTCCCCGTCAAAACGCACCTCCATTCTATAATGGCAATTGCCCTTTACATGAGAAAAGTTCAATCAATGGAGTGTTCTTAGAGGACAACTTTTTCATGGCTGAGAAGGTGAAGAAAGCTCTTCAGCCAGAGTGGCTTAAGTCTCTTCTGAAAAAGACTTTCTTTGAATCTTCCTGTGCAACTCATGCTGCGCTTAAGAATGAGTTAAACAGATTCTGCATAACCTGTACTGAACCAATTTGCCAACATTGTGCATCTGGACCCAAACATGGTCCTCATAAGGTGATCCAAATCTACAGGCATCATTACAAATATGTTGTTCAAATGGATGCTATGAGAGAGCATATTGACTGCTCACAAATTCAGCCCTTCAAATACAATAAGCTCTGGATTATTGCTCTGGAGCCTCTTCCGCACCGAGGTTCTGTAAAATGGAGAAGGGAATCATCATGCAAGACCTGTAGGAGAAAGTTGGGCAACCCCAATTTATATTGCTACTGCTCCATATCTTGCAAGGTGCAAGCTGTTTTAAAGAAGTCTGATGATTCAGCTCCTCCCTTCATGTTGCTTAAGGAGGATCTAAAGGAGGAAGCTGTAGCCAGCAAGCGGGTAAATAAGAGAAAGAGAAAGGGAACCCCTGTCAGAGCCCCCTTCTTCTAA 708 0.4336 MDATKSNACILNLGLLLPRQNAPPFYNGNCPLHEKSSINGVFLEDNFFMAEKVKKALQPEWLKSLLKKTFFESSCATHAALKNELNRFCITCTEPICQHCASGPKHGPHKVIQIYRHHYKYVVQMDAMREHIDCSQIQPFKYNKLWIIALEPLPHRGSVKWRRESSCKTCRRKLGNPNLYCYCSISCKVQAVLKKSDDSAPPFMLLKEDLKEEAVASKRVNKRKRKGTPVRAPFF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc445g00007 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 53 231 - -
Stsc445g00007 235 CDD Bbox2 75 114 - -
Stsc445g00007 235 Pfam PLATZ transcription factor 116 189 IPR006734 -
Stsc445g00007 235 ProSiteProfiles Zinc finger B-box type profile. 75 114 IPR000315 GO:0008270
Stsc445g00007 235 SUPERFAMILY B-box zinc-binding domain 74 128 - -
Stsc445g00007 235 Gene3D Classic Zinc Finger 60 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc445g00007 Stsc-Chr445 30244 33539 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc445g00007 PLATZ 3.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc445g00007 - - ahf:112791659 314.694