Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc43967g00001 | ATGGGACCAAATTACGTTCCTGGTGAGAAGAAAGATCTGTACGTTAAAAGTGTGCAAAGGACTGTCATTTGGATGGGAAAGAGGCAAGAAACAGTGGAGGACGTTCCTTGTGGTAACACAGTTGCCATGGTTGGTTTGGATCAATTTATCACCAAGAATGCCACATTGACAAATGAGAAGGAAGTCGATGCCCACCCCATCCGAGCCATGAAGTTCTCTGTCTCACCTGTCGTGCGTGTTGCTGTTCAGTGTAAGGTTGCATCGGATCTTCCTAAGCTTGTTGAAGGTCTCAAGAGG | 297 | 0.4646 | MGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKR | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc43967g00001 | 99 | CDD | EF2_II | 1 | 59 | - | - | |
| Stsc43967g00001 | 99 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 1 | 99 | - | - | |
| Stsc43967g00001 | 99 | SUPERFAMILY | Translation proteins | 1 | 66 | IPR009000 | - | |
| Stsc43967g00001 | 99 | Gene3D | Translation factors | 1 | 73 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc43967g00001 | Stsc-Chr43967 | 1 | 301 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc43967g00001 | 1 | 99 | Eukaryotic Initiation Factors Gene Family | AT1G56070 | 97.980 | 1.55e-63 | 204 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc43967g00001 | K03234 | - | tcc:18594569 | 201.06 |