Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc4358g00001 ATGGGATTGGGAGGATGGGGTGTTATGGTTGAACATCAAGTTGGAGGTGGTTGGAAGAAAGGTCTTTGGACTTCTGAGGAAGATCGTTTGCTTATTGAATATGTCAAGATTTGTGGTGAAGGACTGAAAAGGAATGGCAAGAGTTGCATTCTGATATGGGTGAATTATCTGAGACCAGATCTCAAGAGAGGCCAAAAACCGCCTCTTGAGGCGGCAGCATTTCAGCAGCAACAACAATTGAAGCTCCAGCAGCAGTTGCAACAACAGCAGCAAATTCAACAAGAAGAACAAATTCAGTTCAACTTGGGCATGAGGGGGATAATGATGAACTTGCTTGAGATGGAAAATCATAATAATGACCATAGAGTCCCTTCAATGTCTCAAGATATTGCCGCCGCTGCCGCCACCACCACCACCACCGCTAACAGCATGTACCAACAACAAAGCTCAACAGAAGAAGAGCATGGATTCTTCTACTACCCCATGATCATCAATAACAATGGCAGTAACAATGAAAATAACTACTCACCAGCAGAAACAACAGAATCTGCATCAAGTGAGGAAATCTTGTGA 573 0.4363 MGLGGWGVMVEHQVGGGWKKGLWTSEEDRLLIEYVKICGEGLKRNGKSCILIWVNYLRPDLKRGQKPPLEAAAFQQQQQLKLQQQLQQQQQIQQEEQIQFNLGMRGIMMNLLEMENHNNDHRVPSMSQDIAAAAATTTTTANSMYQQQSSTEEEHGFFYYPMIINNNGSNNENNYSPAETTESASSEEIL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc4358g00001 190 Coils Coil 75 95 - -
Stsc4358g00001 190 MobiDBLite consensus disorder prediction 170 190 - -
Stsc4358g00001 190 Gene3D - 18 63 - -
Stsc4358g00001 190 PANTHER MYB DOMAIN PROTEIN 55 17 65 - -
Stsc4358g00001 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 61 IPR017930 -
Stsc4358g00001 190 SUPERFAMILY Homeodomain-like 16 65 IPR009057 -
Stsc4358g00001 190 CDD SANT 23 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc4358g00001 Stsc-Chr4358 449 1761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc4358g00001 18 70 MYB Transcription Factor Family AT4G13480 66.667 5.77e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc4358g00001 K09422 - gmx:100782089 105.145