Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc43535g00001 ATGAGGAAAGCAACCACCAAGCAAGCTTCCTCCGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCATCATACCTCACTGGTGAGTTCCCTGGTGACTATGGCTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCAAGGAACCGTGAGCTTGAA 192 0.5573 MRKATTKQASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELE 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc43535g00001 64 SUPERFAMILY Chlorophyll a-b binding protein 14 64 - -
Stsc43535g00001 64 Gene3D Chlorophyll a/b binding protein domain 22 64 - -
Stsc43535g00001 64 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 64 IPR001344 GO:0009765|GO:0016020
Stsc43535g00001 64 Pfam Chlorophyll A-B binding protein 31 64 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc43535g00001 Stsc-Chr43535 42 233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc43535g00001 1 64 Chloroplast and Mitochondria Gene Families AT2G34430 87.500 4.84e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc43535g00001 K08912 - sspl:121759607 134.806