Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc432g00005 ATGGCAGATGAAGATCACACCCCAACAGAAGCAAAAGATTACTATTCAAAATCAATATGGTGGTCAAAAACTCCCAAGAGAAGTGAAAGAAACAATAGTAATGGAGTTAATGGCTTCTATTTTAGTGCTGTTAATGATTACATAGTGACTCCTGAAGTATCTGACTCATTTGAAGAGAACAGAGTTTTGAATAACAGTGCTAGAAGTACTGGAGTCAATAATGAAACCTTCGCGGCCTGTGGCGGCGAAGAGGACGGCGAGTACAACCGGTATTCGATGGTGTCGTTGTCGACGGAAATTGTGGAGATAGTTGAAGATGGCAAGAGCATAACAAGCAACAAGGATAGAAGAGATGATGACATTTATGTTGCTGTTGGTAAAGATGACATGGATTTGGTGCAATGGGTTCTTGATCATGTTGTTTCTTCCCGTGCTCGGATTTTTCTTGTCCATGTTTCGCCGCCGATTACAATGATTCCCACACCAGTTGGAAAGTTTGATAGAAGCCAATTGACACCGCAACAAGTGAGATTTTACGTGAATGAAGTGAACAGCAAGAGGAAGGAACTTTTGCAGAAGTACATCCAGCTCATCAATGAAGCCAAGTTAACAGCTGAAACGTTGCTTCTTGAGAGCAATGACACAGGAAAAGCCATTCTGGATCTCATCTCTATACTTAACATATCCAACATGATCATAGGAATGAAAAAGCTACCCTACACAAGGAACAGGCGCAGCAATAAATTGAGCAAAGGAGAATTTGTAAAGAAAAATGCACCAATGTCCTGTGAAGTTACCTTGGTTTGTCATGGTGAGGAGTTTATAGCTACCCCTTACATGGATCAATTTGCATCTAAAGGCCAAGTGACAGTGCCAATGGCAGTGTCCCAAAGTAAAGGTCACTCAAAAAGCTACTTCTTTCCCTGTGCATGCCTTTTCACAGGCAAGTGCACTTAA 957 0.4148 MADEDHTPTEAKDYYSKSIWWSKTPKRSERNNSNGVNGFYFSAVNDYIVTPEVSDSFEENRVLNNSARSTGVNNETFAACGGEEDGEYNRYSMVSLSTEIVEIVEDGKSITSNKDRRDDDIYVAVGKDDMDLVQWVLDHVVSSRARIFLVHVSPPITMIPTPVGKFDRSQLTPQQVRFYVNEVNSKRKELLQKYIQLINEAKLTAETLLLESNDTGKAILDLISILNISNMIIGMKKLPYTRNRRSNKLSKGEFVKKNAPMSCEVTLVCHGEEFIATPYMDQFASKGQVTVPMAVSQSKGHSKSYFFPCACLFTGKCT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc432g00005 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 83 312 - -
Stsc432g00005 318 Gene3D HUPs 115 242 IPR014729 -
Stsc432g00005 318 Coils Coil 180 200 - -
Stsc432g00005 318 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 129 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc432g00005 Stsc-Chr432 23675 25081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc432g00005 118 271 U-box Gene Family AT2G45910 27.848 3.43e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc432g00005 - - pvu:PHAVU_003G204300g 363.614