Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc432g00003 ATGGCGGAGATTTCAAGCATGGGGAGGCTGCAGCACAAGAATTTGGTCCAAATGAGAGGGTGGTGCAGAAAAGGGAACGAGCTCATGCTGGTTTATGACTTCATGCCCAACGGGAGCCTCAACAAGTGGGTGTTCGACAACCCGCCGAAGCTTCTAGAATGGGGGAGGAGGCGGAGGGTGCTTGTCGACGTGGCGGAGGGGCTCAACTACCTTCACCATGGGTGGGACCAGGTTGTTATTCATAGGGATATTAAGTCTAGTAATATCTTGCTAGACTCTGAAATGAGGGGGAGGCTTGGGGACTTTGGTTTGGCCAAGCTCTACCAGCAAGGGGAGGTTCCCAACACCACGCGTGTCGTCGGCACGTTGGGGTACCTCGCCCCAGAGTTGGCTACCGTGGCGGTGCCAACTTCGGCGAGTGATGTTTATAGTTTTGGAGTGGTGCTTTTGGAAGTGGCGTGTGGGAGGAGGCCGATTGAGACGTCGGCGGCGGAGGAGGAGGTGGTTCTCATGGATTGGGTGAGGGAGCTGTATGCCCGGGGGAGTGTGTGTGAGGCTGCAGACCCAAGGCTTGAGGGGGAGTACGAGGATGAGGACATGGAGATGGTGCTCAAGCTTGGGTTGGCTTGTTGCCACCCTGAGCCTCAGAGGAGGCCAACCATGAAGGAGGTGGTGGCGGTGCTCATCGGGGACAACGTCTCGGAGGAGCCGGGGAAAGTGTTGACTGATTTGGCGCGTGGCAACGGTGGTGGTTCGGGGGAAGAGGAGGAGACCACGGCTTTACGGGACAACCTTCCTGTTTGA 804 0.5734 MAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDFMPNGSLNKWVFDNPPKLLEWGRRRRVLVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELATVAVPTSASDVYSFGVVLLEVACGRRPIETSAAEEEVVLMDWVRELYARGSVCEAADPRLEGEYEDEDMEMVLKLGLACCHPEPQRRPTMKEVVAVLIGDNVSEEPGKVLTDLARGNGGGSGEEEETTALRDNLPV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc432g00003 267 Gene3D Transferase(Phosphotransferase) domain 1 39 239 - -
Stsc432g00003 267 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc432g00003 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Stsc432g00003 267 FunFam L-type lectin-domain containing receptor kinase S.4 35 240 - -
Stsc432g00003 267 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
Stsc432g00003 267 PANTHER - 1 231 - -
Stsc432g00003 267 Pfam Protein kinase domain 2 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc432g00003 267 MobiDBLite consensus disorder prediction 243 267 - -
Stsc432g00003 267 PIRSF ILK 1 237 - -
Stsc432g00003 267 SMART serkin_6 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc432g00003 267 SUPERFAMILY Protein kinase-like (PK-like) 2 228 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc432g00003 Stsc-Chr432 17177 18151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc432g00003 1 230 Receptor kinase-like Gene Family AT1G15530 74.892 4.64e-124 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc432g00003 Pkinase 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc432g00003 - - pcin:129309359 437.573