Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc432g00002 ATGGAAAACAAAACACACACTAATAATAATAACACTATTAAATTCCTCTATAGTTACGGCGGCAGGATCCTCCCCCGCTCCACTGACGGCCAACTCCGCTACACCGGTGGCCACACCAGAATCCTCACCGTCAATCCTTCCATCACCTACTCTGAGTTGATAGCGAAGCTTTGCGAGTTGTGCGGTTTGCCGGCGACGTTGAAGTGTCCGTTGCCGAACGGAGACTTGGAAACTCTGGTTTCCGTTAAGAACGACGAAGATTTGGCCAACATACTTAAGGAATATGACAGAGCCTCGTTGTCGTTGCCTAATCCGTTGAAGATCAGAGCCATTCTATCGCTGCCGAGTTCTCTCATGAAACCGTCTCCTACTCCTCCGTCATCGTTGTCATCTTCGTCTTCGTTGTCCTCTTCCAGTGCCGCTCGCTCTCCCCTTGGATCTTCTCGATCCTCTGCCGAATCTCCACCGTACGCGGCGCCACACAGATTCGTACGCCGGAATTTCTCGCCGGCGGTGTATGGAGGTTGTTGCTGCACGCCGCACTTCCATGGAAGCCCTAGATTCCTCTACCGCGGTCCTCACTCCAGTTATTACTGCCACTGA 603 0.5224 MENKTHTNNNNTIKFLYSYGGRILPRSTDGQLRYTGGHTRILTVNPSITYSELIAKLCELCGLPATLKCPLPNGDLETLVSVKNDEDLANILKEYDRASLSLPNPLKIRAILSLPSSLMKPSPTPPSSLSSSSSLSSSSAARSPLGSSRSSAESPPYAAPHRFVRRNFSPAVYGGCCCTPHFHGSPRFLYRGPHSSYYCH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc432g00002 200 Gene3D - 33 112 - -
Stsc432g00002 200 Pfam PB1 domain 28 98 IPR000270 GO:0005515
Stsc432g00002 200 MobiDBLite consensus disorder prediction 123 154 - -
Stsc432g00002 200 MobiDBLite consensus disorder prediction 118 157 - -
Stsc432g00002 200 SUPERFAMILY CAD & PB1 domains 29 116 - -
Stsc432g00002 200 CDD PB1_UP2 18 112 - -
Stsc432g00002 200 PANTHER OS05G0427100 PROTEIN-RELATED 9 144 - -
Stsc432g00002 200 SMART PB1_new 27 113 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc432g00002 Stsc-Chr432 8075 9239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc432g00002 13 97 MAP Kinase Kinase Kinase AT5G57610 52.941 6.38e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc432g00002 - - gmx:100810563 185.652