Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc42g00030 ATGGATAAAGGAAAGGGAAAATCTCTCTTGAATCCTTTCAAAAACATCACAAAAGATCCAAACTTATGGAGTTTGGATATTTCGGACCATTACTGTGGTCAGTTTTCTTATTCAACTGTGAGAGCTACTGATCCTCATACGCAAGATTATTCGCAAGTGGAAATATCATCAAAAGCCCTCTATATCGGGATATACGACGGGCATTGCAGCCCTCACACGGCTCAGTTTCTGAGTGAGAATCTGTTTAGAAGGATAGTTGATACTATTAATAGTCCAAGAGATATGAGTGTAGCAACATTTAGCAATGCAATTGCAACTATTGAACGTCAGTATTTGGAGGAAGTGTGGAACAACCAACATATACCAAAGATACTGGAAAGCGGCAGTTGTTGCTTGATGGCTTTTCTCTATAGAGGAAACCTCATTTTCGTTAATGTGGGAGATAGCGGTATATCTATTGGGCATGGGTCTGGCGGCTCTAACATGTTGACCAATGACTTCAACATTACGAGAGACAAGACTTTTAGGAAAAACTATAAAGAAACCCACAGCGATAATGACCCAAAACCATGGGTAAAAATAGCGGGAATACGATGCATGAAGGGAATTTCAGGCATTCATGTAACAAGAGCAGTGGGTACTGCTTGTTTGAAAGAGGAAAGGTTCAGAGCTCTTTATCGCAGGAAAATTGTGGCATCAACATCATCGTCCAACACACTATCACATCCTCTTCCCAGAGCTTACATTACTCTAGAGTCAGACACACTTACCTATCCTCTGGTTCAGCAAGACAGACACATTATTTTTGCATCGGGAGGATTCTGGGATTTAATGACACACCGAGATGCTTCAAAAGTTGTATTCGAAAATAAAAGGGAGGGAATTGCTAGAAAGTTGATCAAAGAAGCAATCAAGAGAGGAGTGAAAAAGAGAGATGCATCAACTTTTATTCCCTAG 957 0.4033 MDKGKGKSLLNPFKNITKDPNLWSLDISDHYCGQFSYSTVRATDPHTQDYSQVEISSKALYIGIYDGHCSPHTAQFLSENLFRRIVDTINSPRDMSVATFSNAIATIERQYLEEVWNNQHIPKILESGSCCLMAFLYRGNLIFVNVGDSGISIGHGSGGSNMLTNDFNITRDKTFRKNYKETHSDNDPKPWVKIAGIRCMKGISGIHVTRAVGTACLKEERFRALYRRKIVASTSSSNTLSHPLPRAYITLESDTLTYPLVQQDRHIIFASGGFWDLMTHRDASKVVFENKREGIARKLIKEAIKRGVKKRDASTFIP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc42g00030 318 CDD PP2Cc 48 307 IPR001932 -
Stsc42g00030 318 ProSiteProfiles PPM-type phosphatase domain profile. 34 318 IPR001932 -
Stsc42g00030 318 PANTHER PROTEIN PHOSPHATASE 32 309 IPR015655 GO:0004722|GO:0006470
Stsc42g00030 318 Pfam Protein phosphatase 2C 56 310 IPR001932 -
Stsc42g00030 318 SMART PP2C_4 14 318 IPR001932 -
Stsc42g00030 318 SUPERFAMILY PP2C-like 33 307 IPR036457 -
Stsc42g00030 318 Gene3D - 24 316 IPR036457 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc42g00030 22 312 PP2C-type Phosphatase Gene Family AT5G06750 32.119 8.42e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc42g00030 K01102 - aip:107628075 156.762