Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc426g00001 ATGTATAAGCAGTATGGCGAAATTGATATTTATAGTCTCTACACCTCAGTTTGTTTTGCCAGTTCAAATGATCAAACTTCACAAACAGAAATGAACCGTTCATTTGGGAAGATGCATAGAATGATGGGAGGTTATGACCCATGCTTGGATCATTATGCAAGAGCCTTTTATAATAGAGCAGATGTTCAGAAAGCCCTCCATGCCAGTGATGGTCACAATCTCAAGAATAGGAGTATTTGCAACTTCCATATATACGATAGTTGGAATTGGAACAAATCAAAGGCCTCTGTTATCCCAATATACAGGAAGCTTATTTCAGGAGGACTTAGGATTTGGGTTTATAGTGGAGACACAGATGGAAGAGTGCCAGTGCTTTCAACAAGATACAGTTTGAGGATTCTAGGTTTGAGTATAACTAAGACATGGAGGCCATGGTACCATGAGAAAGAGGTTAGTGGGTGGCAGGGACGGATTTATGCATTGGTTTGTGGGGCAACTGCCCATTAG 507 0.4083 MYKQYGEIDIYSLYTSVCFASSNDQTSQTEMNRSFGKMHRMMGGYDPCLDHYARAFYNRADVQKALHASDGHNLKNRSICNFHIYDSWNWNKSKASVIPIYRKLISGGLRIWVYSGDTDGRVPVLSTRYSLRILGLSITKTWRPWYHEKEVSGWQGRIYALVCGATAH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc426g00001 168 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 149 IPR001563 GO:0004185|GO:0006508
Stsc426g00001 168 Pfam Serine carboxypeptidase 3 155 IPR001563 GO:0004185|GO:0006508
Stsc426g00001 168 Gene3D alpha/beta hydrolase 2 164 IPR029058 -
Stsc426g00001 168 SUPERFAMILY alpha/beta-Hydrolases 4 155 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc426g00001 Stsc-Chr426 2339 4731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc426g00001 53 154 Calmodulin-binding Proteins AT2G22960 30.392 1.23e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc426g00001 K16297 - gmx:100819700 242.662