Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc424g00004 ATGGAAGCTACTAGTTCAGATCCATCATTGGAAGCGGATTCAGATCGTTCACGTGAATCAGACAACACAGAGCAGTTTTCATGTGATGTTGATGATCAATATGTCCCAAAGGTTGGGATGCTTTTTGGATCACTCGAGGAAGCTAGGAAGTTTTATGCGGATTATGCTAGACGCGTAGGCTTTTCCACGAAAATAAGGAACACAAATCGGAGTAAGAAATCCAATCAAATTCTGAACCAGCTTCTCTCATGTAATAGAGAGGGGAAAAGGCGGTCTAATGTGCCTGTTTCGGAGAGGACAAATGCTGTATACGCTGCTAATTGCCCGGCGATAATGTATATTCATCATTTGAATATGATTGATTCTTGGGAGATATCAAAGGTGGTTTTGGAACATTCATATCCTTGCTGTCCAATTGAAGCAGAAATGTTTCCTCAATACCGTCTAATGAGCATGCAGGTTCGCCGGACTATTGAGATTAATGATTAG 489 0.4131 MEATSSDPSLEADSDRSRESDNTEQFSCDVDDQYVPKVGMLFGSLEEARKFYADYARRVGFSTKIRNTNRSKKSNQILNQLLSCNREGKRRSNVPVSERTNAVYAANCPAIMYIHHLNMIDSWEISKVVLEHSYPCCPIEAEMFPQYRLMSMQVRRTIEIND 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc424g00004 162 MobiDBLite consensus disorder prediction 1 26 - -
Stsc424g00004 162 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 161 - -
Stsc424g00004 162 MobiDBLite consensus disorder prediction 9 25 - -
Stsc424g00004 162 Pfam FAR1 DNA-binding domain 50 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc424g00004 Stsc-Chr424 8495 9667 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc424g00004 FAR1 5.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc424g00004 - - adu:110280446 166.777