Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc41g00018 ATGAGGCACAGTTACAGCTTAGATCAAGGGAAGAAGGTGGCTAGTGCAGGATATGGATTGGACCTTACTGTTGCAGTTGATATTTTTGAAACTGTGAGGTCCACAGATGGGTTAGCAGTTGCTATAGTTTTGAGGCCTTTTAGCTTTGAAGGGTTAAGACGACAGGATGAGGTGAAGGATTTGGTGGGGAAGCTTAAGGAGAGCACGGATTTAATTATAGAAATTGATATTGATTCACTGCTTCAAAAAGATTTGTTGACTCTAGATGAGGCCATGAAGACTGCAAACAATGCAGTTTTGTTGGCTATTAAGGCCATATATGTATTAAAATCTGAGATGCATAGAAAACTTATAGATAGATTGCATGATGGTGCGATAGAAGCCAGCACTTTAGAAGTTAATAAAGATCCAACTAGCATTGTTATATGCATTCTTGCTAGTTCAGTGCCCATTAATGATAGCGATATAGCAGCCTTTCTGCGTACATTCCGGCAAACTACAGCATATAAAGGGGACATTATAGCATCCACAATCTGTGAGCCAAATGTTGAGCCCAACTTATGGATAACAACTGTCCTTGCACTTGGCAGTTCAAAATTGAAACAATCTGTCCAGAGTGTTGGTATACTGTCCAGACTGGCCCTGCATTTTCCTCGTGTTTTTAGCTTTTGGGGGATGCATAACCAGCAACAAGTTCACGTGGGGAAAGAGTGTGCAACATCTTCTCAGAAAGTGGTGGAGTCTTATGAAATGAAGGAGGAGAATAGGAATGCTGCGCATTTTGTAGATGGCAGTTTTAATAATCATGATGAACAGTTGAAGCCAAGAGTGAACAGCAGCAGCTCAAAGTTGGCTACTTTGAGGTTTTCTGAAAAAGAAGATATGTTTGACTCTATAGCCCAGAATTCTCTCCCTGATGACTCTATTACTGAAGATGACTCTGCTTTTGAAAGGGAGCAACTTGAAAACTGGAATCTGGGTCCTGGATATGAGGTGGCAAGGGAGTGGGCCCAAGAAAGGGTAGCTGATGCGGCGCATATGATTGATAACCTAAGCATATTCCACCTTCCTGTAGGTGTGAGGCCTTCAGAAGATTTGAAAGATTGTTTAAAAGTCTCATTCATGACAGAACAGAAGGATCTGGAATTCAATGAAGTAAATCTATCAACAATAAATGAGGCCATGTCTTGGAATGCAGTGACTGATGCAAGTTTAGAAGCAGTAAAGGGATTGGCATCTTCACTTTTGAAGGGTAAAGATGCTACTAAACCAAAGAAACATGGAGTACTATCTAATAGAGCTGCTTCTATGCTGGAGGCTGAACGGGACTTGTCAAAAAAGTGGAATCCTGGGCGTCTTGTTCTTGGAGATGGAAGTATATATGATGGCTCATGGCGCCATGGTAAGAGATCAGGCTCAGGTACCTTCTATTTCAAAAACGGAGACATGTTTCAAGGATCATGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAAGCCAATGGTGAGGGGCGGTTCTACAGCAAGTCTGGTGATGCCTTCTTCGGGAATTTCAAAGATGGTTGGCGGCAAGGCCAATTTCTTTGCATCAATGCTAACGGAACGAGGTATATTGAGATTTGGGAACAAGGTGTTCTTTTAGACATCAAACAGTTAGATGACCAAGCACTATAA 1722 0.4193 MRHSYSLDQGKKVASAGYGLDLTVAVDIFETVRSTDGLAVAIVLRPFSFEGLRRQDEVKDLVGKLKESTDLIIEIDIDSLLQKDLLTLDEAMKTANNAVLLAIKAIYVLKSEMHRKLIDRLHDGAIEASTLEVNKDPTSIVICILASSVPINDSDIAAFLRTFRQTTAYKGDIIASTICEPNVEPNLWITTVLALGSSKLKQSVQSVGILSRLALHFPRVFSFWGMHNQQQVHVGKECATSSQKVVESYEMKEENRNAAHFVDGSFNNHDEQLKPRVNSSSSKLATLRFSEKEDMFDSIAQNSLPDDSITEDDSAFEREQLENWNLGPGYEVAREWAQERVADAAHMIDNLSIFHLPVGVRPSEDLKDCLKVSFMTEQKDLEFNEVNLSTINEAMSWNAVTDASLEAVKGLASSLLKGKDATKPKKHGVLSNRAASMLEAERDLSKKWNPGRLVLGDGSIYDGSWRHGKRSGSGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYSKSGDAFFGNFKDGWRQGQFLCINANGTRYIEIWEQGVLLDIKQLDDQAL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc41g00018 573 Gene3D - 512 567 - -
Stsc41g00018 573 Gene3D - 460 511 - -
Stsc41g00018 573 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 32 560 - -
Stsc41g00018 573 Gene3D Tubulin/FtsZ, GTPase domain 12 196 IPR036525 -
Stsc41g00018 573 Pfam MORN repeat 461 483 IPR003409 -
Stsc41g00018 573 Pfam MORN repeat 511 528 IPR003409 -
Stsc41g00018 573 Pfam MORN repeat 484 506 IPR003409 -
Stsc41g00018 573 SUPERFAMILY Tubulin nucleotide-binding domain-like 13 108 IPR036525 -
Stsc41g00018 573 SMART morn 459 480 IPR003409 -
Stsc41g00018 573 SMART morn 528 549 IPR003409 -
Stsc41g00018 573 SMART morn 482 503 IPR003409 -
Stsc41g00018 573 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 451 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc41g00018 Stsc-Chr41 74876 81991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc41g00018 13 569 PP2C-type Phosphatase Gene Family AT1G75010 43.922 3.88e-150 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc41g00018 - - aip:107618192 901.738