Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc41g00014 ATGGCTGGTGCACTTGTTGGTGGAGCTTTCCTCTCTGGCTTCATTAACGTTGTCTTTGACAGGTTCCTTACAACTGACTCTGTCAACTTGGTGTTGGGCAAGAAGCTTGGCCCTGACTTGGTTGAGAGGCTGAAGATTTCCCTGCTTGCTGCTGAAGCTATGGTTGATGATGCTGAGTACAAGCAACTGGGTGATGAACGTGTGAGGGAGTGGTTCAACAGTCTCAAGGATGCTGTTTACAATACTGATGACTTGCTGGACGATGTCCACACCAAAGCCGCCACTAAAAAGAAGGTACTTTCTTTCTTGCCTAGTTTTTTCCTCAACCGATTTAGGAAGACGGTGGATAAGATGGAAAGGGTGGTTAGAAGGATAGAATTTCTTGAAAAGCAAAAGGATTTCCTTGGTCTGGAAAAGAATACCAAGGATAATAACTTGTCATCATCATCATCATCATGGAGAGCATCCACATCACTGGTGGAAGGGAATATATATGGCAGGAAGGATGATCAAGAAGCTTTAACCAAAATAATAAATGACAACAGTGAAAGCCAGTTATCTGTTATCCCTATCGTTGGTATGGGTGGGGTTGGTAAAACTACCTTAGCAAAACTGGTGTACAATAACAGAGAGGGATTTGATTATAAAGTATGGGTTTGCATCTCCGAAATATTTGATGTTGTTGAGATTACAAGGAAAACCATTGAGGAAATTACTAAAAGTACTTGTACCCTTGGGAGTTTAAATTTGCTTCAACTTAAATTGAAGGAAATCTTGTCCGAAAAGAAGTTCTTTATTGTTCTAGACGATGTCTGGAGCGATGATGTCGATATATGGAAGAAATTTATAACTCCTTTTCACTGCGGGGCTAAGGGTAGTACAATTCTTCTAACAACTCGCATCCAAGAGGTTGCTTCCATAGTTCAAACATTTCCCTCTTACTTTCTTAATGAGTTGTCAGAAGATTATTGCTGGTTACTGTTTGCAGACAATGCCTGTTTTCCGGAGTCAAACGGGAATTCAACACTAGAGGAAATCGGTAGAAAGATTGTGAAGAAGTGTAAGGGGCTGCCATTAGCTGTAGAAACACTCGGGCGCTTGTTGCGAGGAAAGGATGATGTTAAAGAATGGAATGCTGTTTTAACAAGTGACATCTGGGAATTTTCTATGAAAAATAGTAAAATTGTTCCAGCATTGTTTATAAGCTACCATCAGCTTCCTGACTATTTGAAGCGTTGTTTCGTTTATTGTTCATTGTACCCCAAAGATTACTGCTTTAATAAAGATGAACTAATCTTGTTGTGGATGGCCGAAGATCTTTTAAGACCACCAAGGAGAGGAGAGAGTTTAGAAGACGTTGGTTACGAGTGTTTTGAAGAATTAGTTTCCAGGTTATTTTTCAAAAAAGATCTGTATTCTTGTTATAAGATGCATGATCTATTGCATGACCTGGCTGTTTTCCTTGCCGGAGACTTCTATTGTAGATTAGAAGAGCATGGTGAAGCAAAAGGAGTGACTACTTTGACTCGACATCTGTCTTATAAAAGCATCTCAGAAAATCTTGATTTGATCATTCAAGTTAAATCTTTGAGGACATTCTTGCGATGCAGTGTCTTTGATTTGATCAGCGACATTGATGATGTAATTATTTGTATCTTAATATCGAAGATGAAATATTTGAGAGTTTTGTCATTTGTCTGGTCCCCAAAACTTGATGTATTGCCTGATTCAATAGGGAAATTGATTCATCTACATTATTTGAATCTTTCTGGGACTAATGTTAAAACATTACCCGAGTCATTATGCAACTTGTATAATCTACAGACATTAATATTGTTCAGATGTAAAAGGTTGACCAAGTTTCCTAGAGTCATGCATAATCTTGTGAATTTACAACATCTTGATCTCAGGGAAACTTCTTTGAACGAAATGCCAGGAGGATTAAGCAAATTGAAACACTTGCGGATTTTAGATTACTTTATTGTGGGCAAACATGAAGATAATGGAATCCGGGAATTAGGAGGGCTCTCAAATCTTCGAGGTTCATTTGATATTAAGAAGTTGGAGAATATTGTTGATGCCGAGGAAGCGAAAGATGCAAGGATGATGAATAAGATACACATCAGTGAATTATGGTTAGAATGGTCTCCAGTTGATGATATGATTTCAAACACGCAAACTGAAAGAGATATACTCAACAGCTTGCAACCGCACAATGGCTTGAAAGCATTGACAATATGGGGATACAAGGGTAGAGTATTTCCAGATTGGTTAGGGCACTCTTCCTACAACATCATGACAAGTGTATCTCTGATATGTTGCAACAATTGCTGCATGCTGCCTTCACTTGGACAACTGCCATCTCTTAAGTCCCTACACATTCAAAGTTTTGGTCAGTTGAAGAGTGTTGGAATTGAGTTTTACAAGAATGAAGGCGATCATGATTTGTTGCCTACTGCAGCGTTTCCTTCACTGGAAACATTGGAATTTCATGATATGCCATGTTGGGAGTTGTGGCACTCACCTGACTCAGAAACTTTTCCTCAACTCAAGAAGCTTCTGATAAGAGATTGTCCAATGCTGAAGGGTGATATGCTTATTCACATATTATTGAGAATGATTTCCTTTTCGAAAGTTTGCAAACTAAAGATAAGGGAGGATCGTGGAAGCTCATCTCATGAGATGGTAATCGATGGAGAGACTTTATCAATCATTGCAAGTGAGTCGGTGGTGGAGTCTGCATTTAATTCAATGAGCATCAACCATCTAACTTGCCTCCAAGAAATGCAAATCTCAAGCTGTTCATCTGTTGTATCCTTTCCGGGGAATTATTTACCCAAATCTTTGAAAAAGCTTGAAATCTGGAGTTGCAGAAAACTGGAATTCCCCCAGCAACAACAGAAACATGATTTGGAAGAGCTACAAATAGTATACAGCTGCGATTCACTCACCTCATTCTCCTTGGATGCCTTTCCCTTTCTCAAGACTCTCTGGATACTAGATTGCAAGAATCTGGAATCAGTTTCAATGTCAGAACCACCACACACTGCTCTTGAATCTCTCTCAATCGATGGGTGCCCCGAGTTTGTGTCCTTTCCAGGAGAAGGACTTGCTGCACCCAACTTGACTTATCTTAGTGTTAGTTTCTGCAACAAGTTGGAGGCATTGCCGAGTCTCATGAATACTCTTCTCCCAAATTTGGATTCTCTAGACCTTCTATGTTGCCCAAACATTTGTAAGTTGCCAGAGGGTGGTTTGCTGCCTAACTTGAAATCACTTACCGTGGGAGGTTGCGAGCAACAAGTGAGAGATCTATCATGGATGGGCAAATTGGACACCCTCACTCATCTTACCATTAATGGTAATTGCTGTGAGAATGTGAAGTCATACCCAGAGTTGGGTTTGCTACCTCATCTTCCCTCTCTTACCACTCTAGAGATCAGTTGGTTTAATAATTTGGAGACTTTTGAGTGTAACCAGCTTCTCCACCTCACCTCCCTCCAACAACTACACATTTTATACTGTCAGAAGTTGGAGAATATGGCAGGAGAAAAGCTGCCTTCCTCTCTCTCCCTTCTCAAATTTTATTGCTGCCCATTGCTTGGAGAACACTGCAAGAACAAGCATCAACGCATTTGGCCCAAAATTGCTCACATCCCCACCATTATAGTTGATGAAAAACAAATTGATTTCTCACCAGGTAGCTTGTGA 3711 0.3999 MAGALVGGAFLSGFINVVFDRFLTTDSVNLVLGKKLGPDLVERLKISLLAAEAMVDDAEYKQLGDERVREWFNSLKDAVYNTDDLLDDVHTKAATKKKVLSFLPSFFLNRFRKTVDKMERVVRRIEFLEKQKDFLGLEKNTKDNNLSSSSSSWRASTSLVEGNIYGRKDDQEALTKIINDNSESQLSVIPIVGMGGVGKTTLAKLVYNNREGFDYKVWVCISEIFDVVEITRKTIEEITKSTCTLGSLNLLQLKLKEILSEKKFFIVLDDVWSDDVDIWKKFITPFHCGAKGSTILLTTRIQEVASIVQTFPSYFLNELSEDYCWLLFADNACFPESNGNSTLEEIGRKIVKKCKGLPLAVETLGRLLRGKDDVKEWNAVLTSDIWEFSMKNSKIVPALFISYHQLPDYLKRCFVYCSLYPKDYCFNKDELILLWMAEDLLRPPRRGESLEDVGYECFEELVSRLFFKKDLYSCYKMHDLLHDLAVFLAGDFYCRLEEHGEAKGVTTLTRHLSYKSISENLDLIIQVKSLRTFLRCSVFDLISDIDDVIICILISKMKYLRVLSFVWSPKLDVLPDSIGKLIHLHYLNLSGTNVKTLPESLCNLYNLQTLILFRCKRLTKFPRVMHNLVNLQHLDLRETSLNEMPGGLSKLKHLRILDYFIVGKHEDNGIRELGGLSNLRGSFDIKKLENIVDAEEAKDARMMNKIHISELWLEWSPVDDMISNTQTERDILNSLQPHNGLKALTIWGYKGRVFPDWLGHSSYNIMTSVSLICCNNCCMLPSLGQLPSLKSLHIQSFGQLKSVGIEFYKNEGDHDLLPTAAFPSLETLEFHDMPCWELWHSPDSETFPQLKKLLIRDCPMLKGDMLIHILLRMISFSKVCKLKIREDRGSSSHEMVIDGETLSIIASESVVESAFNSMSINHLTCLQEMQISSCSSVVSFPGNYLPKSLKKLEIWSCRKLEFPQQQQKHDLEELQIVYSCDSLTSFSLDAFPFLKTLWILDCKNLESVSMSEPPHTALESLSIDGCPEFVSFPGEGLAAPNLTYLSVSFCNKLEALPSLMNTLLPNLDSLDLLCCPNICKLPEGGLLPNLKSLTVGGCEQQVRDLSWMGKLDTLTHLTINGNCCENVKSYPELGLLPHLPSLTTLEISWFNNLETFECNQLLHLTSLQQLHILYCQKLENMAGEKLPSSLSLLKFYCCPLLGEHCKNKHQRIWPKIAHIPTIIVDEKQIDFSPGSL 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc41g00014 1236 Gene3D Ribonuclease Inhibitor 1038 1215 IPR032675 -
Stsc41g00014 1236 PRINTS Disease resistance protein signature 258 272 - -
Stsc41g00014 1236 PRINTS Disease resistance protein signature 354 368 - -
Stsc41g00014 1236 PRINTS Disease resistance protein signature 188 203 - -
Stsc41g00014 1236 PRINTS Disease resistance protein signature 921 937 - -
Stsc41g00014 1236 SUPERFAMILY L domain-like 917 1198 - -
Stsc41g00014 1236 PANTHER DISEASE RESISTANCE PROTEIN RP 50 858 IPR044974 GO:0006952
Stsc41g00014 1236 Coils Coil 685 705 - -
Stsc41g00014 1236 Gene3D - 22 128 - -
Stsc41g00014 1236 SUPERFAMILY L domain-like 476 868 - -
Stsc41g00014 1236 Gene3D Ribonuclease Inhibitor 900 1037 IPR032675 -
Stsc41g00014 1236 Pfam NB-ARC domain 169 383 IPR002182 GO:0043531
Stsc41g00014 1236 Gene3D - 154 311 IPR027417 -
Stsc41g00014 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 417 IPR027417 -
Stsc41g00014 1236 Pfam Rx N-terminal domain 39 98 IPR041118 -
Stsc41g00014 1236 Coils Coil 118 138 - -
Stsc41g00014 1236 SMART LRR_typ_2 581 604 IPR003591 -
Stsc41g00014 1236 SMART LRR_typ_2 628 651 IPR003591 -
Stsc41g00014 1236 Gene3D Ribonuclease Inhibitor 527 890 IPR032675 -
Stsc41g00014 1236 Gene3D - 318 407 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc41g00014 Stsc-Chr41 44879 49403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc41g00014 189 658 WRKY Transcription Factor Family AT5G45050 24.206 2.96e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc41g00014 - - adu:110277908 1443.33