Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc414g00004 ATGGGACCTCCAGGACCACCCACTCAAATTGGTGGTGCTCCATCTGTGACGCCTTCCCTTTTGAGATCGAATTCCGGAATGTTAGGGGCTCAAGGGGGCCCCATGCCTTCACAGTCTTCTTTTCCTTCTCTTGTGTCGCCACGCACTCAGTTCAACAACATGAACATTCTGGGAAACATGTCTAATGTAACTTCTATGCTGAATCAATCTTTCCCAAATGGAGTCCCAAATCCTGGGATCTCGGGTCCAGGAAGTAGCCAGCGAGGTGTTGTTGATACTGGAGCCGAAACAGATCCGATGTCAAGTGTTGGCAATGGAATGAACTTCAGTAATTCTGCATCCTCGTTCGTACAGTCAAATATGGTAAATGCCGGTTCTTCGGTTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTAGTAACCAGCTGTTGCAAGATCAGCAGCATTCGCAACAGATGGAACCTCAAAATTTCCAACATGGTCAGCAGCCAATGCAACAGTTCTCTGCTCCTCTGAATACGCAGCAGAAACAACAGCAGCAGCATTTTCAATCAATGAGAGGAGGGGTAGGTGGTATGGGACCGGTGAAGTTGGAGCCGCAGGTAAGCAACGACCAACTTGGTCAGCAGCAGCAGCAGCAAATACAATCTTTGAGGAATCTTGCTCCAGTGAAATTGGAACCACAACAAATTCAAACCACTCGAACTCTAGCCCAAGTGAAGATGGAGCCCCAGCATTCTGATCAACCATTATTTTTACATCACCAGCAGCAGCAGCAACAACAACAGCAACAACAACTACAACAGCAGCAGCTCCTCCATATGTCAAGACAATCTTCTCAGGCTGCTGCTGCTCAGATGAATCTTCTGCACCAGCAGAGGCTTTTGCAATTTCAACACCAGCAGCAGCAACAGCTTTTGAAAGCGATGCCTCAACAACGGCCTCAACTGCCACAACAGTTTCAACAGCAGAATATGCCCGTAAGGTCTCCTGTGAAACCAGGATATGAACCCGGAATGTGTGCTAGACGGCTTACACATTACATGTATCAGCAACAGCACAGACCCGAAGATAACAATATCGAGTTCTGGAGGAAGTTTGTCGCTGAATATTTTGCTCCTAATGCCAAGAAGAAGTGGTGTCTTTCTATGTATGGAAGTGGCAGACAAACGACTGGAGTTTTCCCTCAGGATGTCTGGCACTGTGAAATATGTAATCGCAAACCTGGTCGTGGGTTCGAAGCAACTGTGGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCATCTGGGCAGATTGTCCTGGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCCCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTAGGCGCCATGAAGAACTCATTCCTAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTGCTCAAAAATACCAGGCCTTTACTCAAAATGCTACACCAAATGTGTCTGCTCCAGAGTTGCAAAATAACTGCAATATGTTCGTTGCGTCAGCCCGTCAGTTGGCCAAAGCCTTGGAAGTTCCATTAGTAAATGATTTAGGATATACAAAGAGATATGTACGGTGCCTGCAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACGGGGACTGGACCCATGGAGAGCTTAGCCAAATTCCCTCGGAGAACAAGCGGATCATCTGGACTTCATAATCAAGGACAACAACATGAAGATCGATTACAGCAGCAACCGGAGCAGCAACAGCAAATGGCAGCCCATAACACGAATGGTGATCAAAACTCAGTGCAAGCTGGTGCCATGCAAATTGCTTCCAGCAATGGTATGGTCAGTGTAAATAACACTGCCAACTCCGCATCTGCATCGACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAACTCGATGAATTCTAGACAACAAAATTCAATGAACAATTCAGGCAGCCCATATGGAAGCAGTTCTGTTCAGATTCCATCCCCAGGTGGAATGGTAGGTGTTGGTTCTCTTGGGAATGATGTGAAGAATGTAAATGGTATTCTGCCGGTGAATACCAATACAGGGCTCAATGGCGGAAATGGCATGGTCAACAATGGGCCGATGAACAGTAACTCCGGAATGGGTAGCTACGGCACAATGGGTATCGGTCAATCCGGCATGCCCAACGGAATGAGAGCTGCTATGGGAAATAATTCTGTGATGAATGGAAGAGGAGGAATGGCATCAATCGCGAGGGATCAAGCCATGAACCATCAGCAGGATTTGTCAAATCAACTACTTAGCGGTCTAGGAGCGATGGTGATTGGGATGATGTGGTTCTTGGAAGCTGCTTCCCAGCGCCGAGCAATGGTAGATCGCCTTCGGCCGCCGAACCGATATAATACAGCAGAATTGCAATTGGGGTGGTAG 2556 0.4636 MGPPGPPTQIGGAPSVTPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRTQFNNMNILGNMSNVTSMLNQSFPNGVPNPGISGPGSSQRGVVDTGAETDPMSSVGNGMNFSNSASSFVQSNMVNAGSSVQGQGQQFSNPSSNQLLQDQQHSQQMEPQNFQHGQQPMQQFSAPLNTQQKQQQQHFQSMRGGVGGMGPVKLEPQVSNDQLGQQQQQQIQSLRNLAPVKLEPQQIQTTRTLAQVKMEPQHSDQPLFLHHQQQQQQQQQQQLQQQQLLHMSRQSSQAAAAQMNLLHQQRLLQFQHQQQQQLLKAMPQQRPQLPQQFQQQNMPVRSPVKPGYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCLSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNVSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSSGLHNQGQQHEDRLQQQPEQQQQMAAHNTNGDQNSVQAGAMQIASSNGMVSVNNTANSASASTTTSTIVGLLHQNSMNSRQQNSMNNSGSPYGSSSVQIPSPGGMVGVGSLGNDVKNVNGILPVNTNTGLNGGNGMVNNGPMNSNSGMGSYGTMGIGQSGMPNGMRAAMGNNSVMNGRGGMASIARDQAMNHQQDLSNQLLSGLGAMVIGMMWFLEAASQRRAMVDRLRPPNRYNTAELQLGW 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc414g00004 851 MobiDBLite consensus disorder prediction 588 641 - -
Stsc414g00004 851 Pfam LIM-domain binding protein 344 598 IPR029005 -
Stsc414g00004 851 MobiDBLite consensus disorder prediction 125 186 - -
Stsc414g00004 851 MobiDBLite consensus disorder prediction 12 46 - -
Stsc414g00004 851 MobiDBLite consensus disorder prediction 602 641 - -
Stsc414g00004 851 PANTHER LIM DOMAIN-BINDING PROTEIN 230 813 IPR029005 -
Stsc414g00004 851 MobiDBLite consensus disorder prediction 1 46 - -
Stsc414g00004 851 MobiDBLite consensus disorder prediction 125 215 - -
Stsc414g00004 851 MobiDBLite consensus disorder prediction 253 273 - -
Stsc414g00004 851 MobiDBLite consensus disorder prediction 69 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc414g00004 Stsc-Chr414 37182 43147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc414g00004 1 710 C2H2 Transcription Factor Family AT1G43850 66.893 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc414g00004 - - gmx:100787573 1096.26