Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc411g00001 ATGAAGTACTTGGTATCATTGTGCTCATTTTCCCTCATCTCCATGTTTCTACTTCTTTCTCTTGGAACAAAACCACCATTATTCCAAAGCACTACCTTCTCTTCTTCTTTTTTCTCTTTATGGTCACTTCTTACTCTCTTTCTGTCCACAGCCTTTCCTCTTCTTGCTGTCTCCCTTAACTATTGGCTTGTCCCGGGAGGCTTTGCATGGAGAAACTACCAACAACTTTACAAAGAACATGAAAAAATCAATGGTCCTGTGGGGTGGCCTATAATGGGGACTTTGCCCCACATGGGCTCCTTAGCCCATAGAAAACTCGCTGCCATGGCCACTTCGTTAAAAGCAAAGAGACTTATGGCAGTGAGTTTAGGGTCCCAGCCTGTAATTATAAGTAGCCACCCTGACACCACAAGGGAAATTTTATGTGGTTCTAGTTTTTTAGACCGTCCTGTCAAACAATTAGCAAGATTGCTGATGTTTGAACGTGCCATAGGGTTTGCACCGTATGGTACTTATTGGCGCCACCTTCGCAAGGTAGCGTCCACTCACATGTTCTCTCCACGTAGTATTTCCAGCTTAGAGACTCTTCGACAGAAAGTCGCCAACGAAATTGTGGAGAGAACATGGAAGGAGATGGAGGAGAAAGGGGTGGTGGTAGTCAGGGGAATATTGCAAGAAGGGTCGCTTAGCAATGTTTTGGAGAGTGTGTTCGGTAGTAATAACAATTCTATGAGTCCAAAAACAAAGGAGGTTTTGGGTGAAATAGTTAAAGAAGGGTATGAGTTGATTTCCATGTTCAATTGGGAAGATTATTTCCCTTTCAAGTTTTTGGACTTCAATGGAGTGAAAAGAAGGTGTCACAAATTGGCGGCTAAGGTCAACAGTGTGGTGGGTCAAATTGTTAAAGATAGTAAAAAATCGGAGGATTTTGTTGGACAGAGTCATTTCCTTAGCGCTTTGCTTTCTTTGCCCAAAGAAGAAAGTTTTGGTGATTCAGACATGGTGGCTATTTTATGGGAAATGATATTCCGAGGAACAGATATAGTTGCTATACTCCTTGAATGGACTATGGCTAGGCTGGTGTTACACCCGGACATACAAACCAAAGCCCGCCAGGAGATTGATGATTGCGTGGGCTCGAGTTGTCATGTGCAAGACACGGACATTCCAAACCTCCCTTACCTCCAAGCCATAGTGAAGGAGGTTCTCCGGATGCATCCTCCGGGCCCATTACTCTCATGGGCTCGGATTGCAATCCATGATGTCCAGATAGACAAGGTCTTGGTGCCGGCTGGAACACCCGCAATGGTTAACATGTGGGCTATAGCACATGACTCATCGGTATGGGAAGATCCGTGGGATTTCAATCCCGAAAGGTTCATGAAGGAAGATGTGTCCGTCATGGGCTCAGACATGCGGCTCGCCCCTTTCGGCGCGGGCCGTAGGGTGTGTCCAGGCAGGACATTAGGTTTGGCAACGGTTCATGTTTGGCTTGCTAAACTTCTCCACCGTTTTATATGGCTACCGGTGCAGCCTGTGGATCTGTTAGAATGCCTCAAGCTCTCGAATGAGATGAAAAAACTTTTAACGTGCCAAGTGATTTGCAGATAA 1611 0.455 MKYLVSLCSFSLISMFLLLSLGTKPPLFQSTTFSSSFFSLWSLLTLFLSTAFPLLAVSLNYWLVPGGFAWRNYQQLYKEHEKINGPVGWPIMGTLPHMGSLAHRKLAAMATSLKAKRLMAVSLGSQPVIISSHPDTTREILCGSSFLDRPVKQLARLLMFERAIGFAPYGTYWRHLRKVASTHMFSPRSISSLETLRQKVANEIVERTWKEMEEKGVVVVRGILQEGSLSNVLESVFGSNNNSMSPKTKEVLGEIVKEGYELISMFNWEDYFPFKFLDFNGVKRRCHKLAAKVNSVVGQIVKDSKKSEDFVGQSHFLSALLSLPKEESFGDSDMVAILWEMIFRGTDIVAILLEWTMARLVLHPDIQTKARQEIDDCVGSSCHVQDTDIPNLPYLQAIVKEVLRMHPPGPLLSWARIAIHDVQIDKVLVPAGTPAMVNMWAIAHDSSVWEDPWDFNPERFMKEDVSVMGSDMRLAPFGAGRRVCPGRTLGLATVHVWLAKLLHRFIWLPVQPVDLLECLKLSNEMKKLLTCQVICR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc411g00001 536 SUPERFAMILY Cytochrome P450 85 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Stsc411g00001 536 PANTHER CYTOCHROME P450 78A7-RELATED 37 536 - -
Stsc411g00001 536 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS E-class P450 group I signature 112 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 Gene3D Cytochrome P450 71 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc411g00001 536 FunFam Cytochrome P450 78A5 75 536 - -
Stsc411g00001 536 Pfam Cytochrome P450 85 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc411g00001 Stsc-Chr411 11846 14153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc411g00001 28 536 Cytochrome P450 AT1G74110 50.562 1.23e-174 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc411g00001 - - ahf:112715014 804.668