Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc410g00001 ATGGAGTTTGTTGCTGCTAGATCTGGTGGTGATGATGGAGGTGATGCACTCAAGGAAGAGAAGAACAGAAGTGATGACTATAGTGATGGTGGAAGCCATGATCATGATCATGGTGATGATGATGGTGTCTCAAATAATAAGCAAGACACAAAACTTGTGAAGGAACCGCCACCCTTGAATAAGACTAATAACAAGACTGAAAAATCCATGGCGGAAGAAGCTGTTGCAGCTGGAACAAGCACATTATTCGCAGCCAAAAAGGAAGAGGTTATTGATAAACAACTTGAAAGTACCAAAGCTGAAATGGGTGAAGTTAGAGAGGAGAACGAGCGGTTAAAGATGTCGTTGAGCAAGATTATGAATGAGTACAGAATGCTTCAAATGCAGTTTCACAACATAGTTAATAAGCATGAAGATAATAATGAAGAAGAAACAGTAATGGAGGAAGCAGACCTAGTTTCTCTCAGCCTTGGAAGAAGAGTTCCAGTTCCAAGAAGAAGCAATAATAATGAAGAAGAGAAAAAAGCATCTGATAATAATAACAAGAGGAAGAAGGAAGATCAGGAAGAGGATGATGACGAGGAGTTGGCACTTGGATTGGACTGCAAGTTCGAAACTTCGAAATCGGGGAGCACGACGGAGGCTACCACCAATTTGGGGAATAAGGAAGAAGGTGGTGAGAGTACATGGCCACCGGCAAGTAAGGCGAGAGAAGGCGGCGGCGGTGGTGGTGCAACTGCATCTGCATCTGCTTCGGTGGTAGAAGATGAAGTGTCTCAGCAGAATAATAATCCTGCTGCAAAGAAAGCTAGAGTTTGTGTGAGGGCAAGATGTGACACCCCCACTATGAATGATGGGTGTCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGAAATCCATGCCCTCGAGCTTACTATCGCTGCACAGTTGCACCCTCATGCCCAGTTAGAAAACAGGTGCAAAGATGTGCGGAGGACATGTCGATTCTAATCACCACCTACGAAGGCAACCACAACCACCCTCTCCCTCTCACAGCCACTGCCATGGCTTCCACAACCTCCGCCGCAGCATCCATGCTACTCTCCGGCTCGTCAACCTCCCACACCATGCCTTCCCCAAACCCCGCCACCACCGGCCTCAACCTCTACCTCCCAGACGGATCCAAATCAAGACAAATCTACGTCTCAAACCCAGCACTCTCTTCCACCCCTTCTCACCCAACCATAACCCTCGACCTCACTTCTTCAAACCCTAATTCAAATCCCAATCCCTCTTCTTCTCCATTTGTTAGGTTTTCTTCATCAAATTACCCTAACCAACCAATCAGATACCCTTCCTCCACAAGCCTTAGCTTCACCACTTCCACTGATTCCAATCCAATTTCTTGGAGCAATAATGGATTCCTTAGTAACTTCAACACCGCCACTCATCATCATCATCCGTACAACAACAGAAACATCAACATTCTCAGTAATAATAATGTGAACTTTGGAAGGCAACAACAACAGCAACAAACAATGGAAAGCTTCTATCAATCTTTCTTGCAAAGGAACAACAACAATGGCAATAATAATAACTCATCATCATCATCAGATACTATTGCAGCAGCAACAAAGGCAATTACAGCGGATCCGAGTTTTCAATCGGCTTTGGCTGCCGCTTTGTCTTCCTTCATTGGCGGCAGCGGCGGCATTGGAAGCACACAACATCAAGTTGGTGGTGCCGGTGGTGCTGATGGAGAAAATAGTAATAATCTTATTAATCATCAGAAGATGAAATTCTCAGAGCTGTTTCCAGTTTCCTCTGCCTTGGCTTCGAGTTCGAAAGTGAATAACAGTAGTAATAACAATGGCGGATGTGGTTCTAGCTTCTTGAACAAAACGCAACCAGCAAAAACAACAGCACAGAATAATGGAAGTTTCATGTTTCTACCACCATCTTTGCCATTTTCTTCTGCTCCCAAGAGTGCTTCTGCATCTCCCGGTGATAATGGAGGAGATGATCATAGATCATCATGA 2022 0.4461 MEFVAARSGGDDGGDALKEEKNRSDDYSDGGSHDHDHGDDDGVSNNKQDTKLVKEPPPLNKTNNKTEKSMAEEAVAAGTSTLFAAKKEEVIDKQLESTKAEMGEVREENERLKMSLSKIMNEYRMLQMQFHNIVNKHEDNNEEETVMEEADLVSLSLGRRVPVPRRSNNNEEEKKASDNNNKRKKEDQEEDDDEELALGLDCKFETSKSGSTTEATTNLGNKEEGGESTWPPASKAREGGGGGGATASASASVVEDEVSQQNNNPAAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDMSILITTYEGNHNHPLPLTATAMASTTSAAASMLLSGSSTSHTMPSPNPATTGLNLYLPDGSKSRQIYVSNPALSSTPSHPTITLDLTSSNPNSNPNPSSSPFVRFSSSNYPNQPIRYPSSTSLSFTTSTDSNPISWSNNGFLSNFNTATHHHHPYNNRNINILSNNNVNFGRQQQQQQTMESFYQSFLQRNNNNGNNNNSSSSSDTIAAATKAITADPSFQSALAAALSSFIGGSGGIGSTQHQVGGAGGADGENSNNLINHQKMKFSELFPVSSALASSSKVNNSSNNNGGCGSSFLNKTQPAKTTAQNNGSFMFLPPSLPFSSAPKSASASPGDNGGDDHRSS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc410g00001 673 FunFam probable WRKY transcription factor 31 268 345 - -
Stsc410g00001 673 Coils Coil 168 189 - -
Stsc410g00001 673 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc410g00001 673 Gene3D WRKY domain 267 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc410g00001 673 MobiDBLite consensus disorder prediction 398 435 - -
Stsc410g00001 673 Pfam WRKY DNA -binding domain 284 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc410g00001 673 Coils Coil 95 129 - -
Stsc410g00001 673 MobiDBLite consensus disorder prediction 205 224 - -
Stsc410g00001 673 MobiDBLite consensus disorder prediction 1 73 - -
Stsc410g00001 673 MobiDBLite consensus disorder prediction 622 660 - -
Stsc410g00001 673 MobiDBLite consensus disorder prediction 136 263 - -
Stsc410g00001 673 MobiDBLite consensus disorder prediction 165 189 - -
Stsc410g00001 673 MobiDBLite consensus disorder prediction 622 673 - -
Stsc410g00001 673 MobiDBLite consensus disorder prediction 12 48 - -
Stsc410g00001 673 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 68 583 IPR044810 GO:0003700
Stsc410g00001 673 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc410g00001 673 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc410g00001 Stsc-Chr410 5006 10437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc410g00001 88 566 WRKY Transcription Factor Family AT1G18860 40.980 1.71e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc410g00001 WRKY 8.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc410g00001 - - adu:107467779 789.26