Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc40g00019 ATGACCGATTCTTCCTTGCCCGGAACCGGCATCGTTAAAAAATGGGTGCGGAAGCCACTTGTATGGTGTTTATTGATCACCCTCTCAGGTCCGGTTGGATTCATCTTTTTGGCTGTAAGTTTCTTCAATCATCATCTCAAAACATCGAGCCCCATGCTTAAATTCGTCATCATCTTTATTGCTTGCATTTTCCTCATCTGTATTGCATTTTTAATTGCAAAAATATTACAAAAGGGGAGCAATAATCCTTGGGTTAAAGCGCATTTGGTATTTTTGGTGGTGATGGGTACCTACGTCGCTACTTTTTTTCTTGATAAAGAAAAAGAGAAGGGACCGCCGGGTCTCGATGTATATGCGCTGGTATCTTATGCTGCATTTGCTTTGATGTTTTCAAGTCTAGCAATTAAGACTCATCAACACGAACTTTTTGGGGAAATCGTATATTTCTTTCTTGGAGTTCTGGTTATACGACTGATGCAGATAAACCCGTGGTTGTTTTTCCTTGGAGCATGCGTCAGTTATCCACTCATTATTCTTTCTTCATTTCTACATGAACTATTATCCGAAAGAGAAGATGACCGATTAGAAAATCGTGATCTCCATCTCCTCCCCATTCAAATGCCTCCACTACGTGATCGCCTCCTCATTGAAATGCTTCCATCATCATCAGCTTCAGCAACTCCACCAGTAACACGACCTGATACCGAAACTTATCATCTTGATGATACGGATACTATTCCTCTTTTAGTGCCTCCACCAGTTCAATTTCGGCATGATGATCTCGTAGAGGGGTTCAAGAATTCTCTAGGTGAGCTCAATAATTTGGACAGGGAACTTGCCCGCGAGTTACGGCAACCCTTGAATGATTACATTACAGATAGGAGTGAAGCGGTTCCAGAGGTACTGGTGACTGACCGCAATTTCCTACTGGATAGGATTTTGCTTTTGTCAAAGCCAAAGGTACTTGACGTGCTGAATCGCTTGATAATGAATTTCGGCCAGATTGAAGAGGGCATCAAGAATTTGGTGGTGGATGAGTATTGCAGAAGTCGAAAAAGGTTCTTCGAGATATGCCAGACACTTTGCAATCGAGTGTTTCGCTCCTCCTCTGACATCTCCGGGAAGTGTTTCTTGCAGCTTTGCTCTGAATTGGCACCGAGTTTACTAAACTTCGCGGATTATGTTGCAAAGAATAGCCTCAAATATCAGCAGAGTGACTATTTGCCCAACATTTTCCAAGTGTTTAGAACACAACGTCATCTAATTATTCCATCTTTTGAGTTACTGTTTTCTAATACTCCATTCCGCGGTTCACTCTGGACTGAAGCTATCAACGTTGAAGAAAGATTGTGTAGAGCAATTAAGGATTACTTTTTCACGGGATTGGAGGATTTGGTTCACGCAGATGGAACAAGAGTGGAATTCGGAGATTATGAAATTCATCACATTACTGTCCAAGTAATGGAACACCTCGGGGATGCCTTCAATGAAAGATCCACTCTGGAATTAATTCTCCAAGATTTCCCCATACTTAATTTTATGGAAGGAAGATCTTCTCTTTCTGCCCACATTTCTTGGATGATCGATCAGCTGGAGACCCATTTGGAAGCCTTATCCAAAAACAGAGCTTTCCTGAGCTATGATGATTATTACTTCATTAAGAATGTTTGTTACATAGTAAGGAAGGTCCGTGATACTCAATTGGACACCATTCTGGGGCGTATTTGGCTTGAAGAACAAAGTGCCAAAATCTATGAGTACATCAAGGACTATCGAATAAACTCATGGGTTAAGGTGTTGGACTTCGTGAAGTTTGACAGCAATAATATGACGGCAGAGTCAATGAAAGAGAAGCTCCAATTGTTCAACGACCACTTTCCTGAAATGTTTCGTGAACAATCTTTATGGTTTGTTCCCGAAAATAATCCTGATGAAAAGCTAATAGAATCATTGAGCTTCTTCTTTGTCCTAGCATATGAAAATTTCATTGAGAGGGTCAATGTTATTCTTCTAGATCAAGGTCATCAGAACGTGGCTCATTCAACATGGGAAATTTCAAGTTGCCTCAGGAAAATGTCGTATGAATATTCCAAGGAAGAAGATTATGACGATTTAAGGCTACCCAACCTTATACATCATGTTTGA 2145 0.4075 MTDSSLPGTGIVKKWVRKPLVWCLLITLSGPVGFIFLAVSFFNHHLKTSSPMLKFVIIFIACIFLICIAFLIAKILQKGSNNPWVKAHLVFLVVMGTYVATFFLDKEKEKGPPGLDVYALVSYAAFALMFSSLAIKTHQHELFGEIVYFFLGVLVIRLMQINPWLFFLGACVSYPLIILSSFLHELLSEREDDRLENRDLHLLPIQMPPLRDRLLIEMLPSSSASATPPVTRPDTETYHLDDTDTIPLLVPPPVQFRHDDLVEGFKNSLGELNNLDRELARELRQPLNDYITDRSEAVPEVLVTDRNFLLDRILLLSKPKVLDVLNRLIMNFGQIEEGIKNLVVDEYCRSRKRFFEICQTLCNRVFRSSSDISGKCFLQLCSELAPSLLNFADYVAKNSLKYQQSDYLPNIFQVFRTQRHLIIPSFELLFSNTPFRGSLWTEAINVEERLCRAIKDYFFTGLEDLVHADGTRVEFGDYEIHHITVQVMEHLGDAFNERSTLELILQDFPILNFMEGRSSLSAHISWMIDQLETHLEALSKNRAFLSYDDYYFIKNVCYIVRKVRDTQLDTILGRIWLEEQSAKIYEYIKDYRINSWVKVLDFVKFDSNNMTAESMKEKLQLFNDHFPEMFREQSLWFVPENNPDEKLIESLSFFFVLAYENFIERVNVILLDQGHQNVAHSTWEISSCLRKMSYEYSKEEDYDDLRLPNLIHHV 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc40g00019 714 Gene3D Exocyst complex component Exo70 260 697 - -
Stsc40g00019 714 Pfam Exo70 exocyst complex subunit 352 667 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc40g00019 714 PANTHER EXOCYST COMPLEX PROTEIN EXO70 354 688 IPR004140 GO:0000145|GO:0006887
Stsc40g00019 714 SUPERFAMILY Cullin repeat-like 322 674 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc40g00019 Stsc-Chr40 104701 108369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc40g00019 359 665 EXO70 exocyst subunit family AT5G58430 33.546 9.61e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc40g00019 - K07195 ahf:112702737 619.772