Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc40864g00001 ATGAAGGGGCATGATTTTAGGCTGCTCCCTTTTGGTGCTGGACGTAGGGTGTGCCCCGGTGCACAACTTGGGATCAATTTGGTCACGTCAATGTTGGGTCATCTTTTGCATCATTTTAGTTGGGCCCCACCTGAGGGAACAAATGCTGAGGAGATTGACATGTCGGAGAATCCTGGGTTGGTGACTTACATGAGAACACCACTTCAGGCTGTGCCTACTCCTAGGTTGCCCTCACATTTGTATAAACGCGTGCCTGCTGATATTTAA 267 0.4906 MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFSWAPPEGTNAEEIDMSENPGLVTYMRTPLQAVPTPRLPSHLYKRVPADI 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc40864g00001 88 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 11 20 IPR017972 GO:0005506|GO:0016705
Stsc40864g00001 88 Gene3D Cytochrome P450 2 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc40864g00001 88 Pfam Cytochrome P450 2 61 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc40864g00001 88 PANTHER CYTOCHROME P450 98A9 1 82 - -
Stsc40864g00001 88 SUPERFAMILY Cytochrome P450 2 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc40864g00001 Stsc-Chr40864 1 493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc40864g00001 1 88 Monolignol Biosynthesis Gene Families AT2G40890 86.364 2.94e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc40864g00001 K09754 - cit:102624231 175.637