Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc406g00006 ATGTCATCACCACCATCATCACTCATCACTCCCGCCATGGATCCAACCTCCACCGAAGAAGAACTGGTCCTCGACATCTCTCCCTTCCTAAAAACCTACAAAGACGGTCGGATTCACAGACTCATGGGCTGTGACGTCGTTCCGCCCTCACTGGACCCCACAACCAACGTCGAATCCAAAGACATCGTAATCTCCGAAACCGAAGACATCTCAGCCAGGATCTTCATTCCAAAATCCAAAACCCAACAAAACCACAAACTCCCAGTCCTTGTTTACTTTCACGGCGGTGGTTTCTGCATCGAGACGCCTTTCTCCCCGCATTACCACAATTTCCTCAACGCCGTTGCTTCCGAAGCCGGTGTCGTAGGTGTTTCCGTTCATTATCGGAGAGCGCCGGAGCACCCTCTTCCGGTGGCACACGAAGATTCATGGGCGTCCCTCAAATGGGTCGCTTCCCACACGTATGGTAACGGCCCTGAAGAGTGGCTGAACCGTTATGCTGATCTTGATAGGGTGTTCCTCGCCGGCGACAGTGCCGGAGCAAACATTGCACACCATATGGGTGTTCGGGTCGGGACCCAAGGAGTCCCGGGTTTGAAAGTAGAAGGAATTGCTCTTGTTCATTCGTTCTTTTGGGGCGAGGAAAGAATTGGATCCGAAGCCAGCAAAGGGAATGGAAGTTTGGCATTGGTGGAGAAGATGTGGAAATTTGTGTGCCCAACCACGATTGGACTGGATGACCCGTTGATTAACCCGGAAAAGGATCCGAATTTGGGGAAGATGGGTTGCCAAAGGGTGGTGGTTTTTGTTGCGGAGAATGATTTGCTGGCTGACAGAGGTTGGTATTATAAGGAGTGTTTGGAGAAGAGTGGTTGGGGTGGTGTTGTGGAAGTTGTGGAGGCCAAAGGTGAAGGACACGTGTTTCATCTCTTCAATCCAAAGAGTGAGAATGCTCTCTCCTTTCTCAGCAGATTCATTTCTTTCATCAACCACACCTAA 999 0.5065 MSSPPSSLITPAMDPTSTEEELVLDISPFLKTYKDGRIHRLMGCDVVPPSLDPTTNVESKDIVISETEDISARIFIPKSKTQQNHKLPVLVYFHGGGFCIETPFSPHYHNFLNAVASEAGVVGVSVHYRRAPEHPLPVAHEDSWASLKWVASHTYGNGPEEWLNRYADLDRVFLAGDSAGANIAHHMGVRVGTQGVPGLKVEGIALVHSFFWGEERIGSEASKGNGSLALVEKMWKFVCPTTIGLDDPLINPEKDPNLGKMGCQRVVVFVAENDLLADRGWYYKECLEKSGWGGVVEVVEAKGEGHVFHLFNPKSENALSFLSRFISFINHT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc406g00006 332 PANTHER ARYLACETAMIDE DEACETYLASE 26 316 - -
Stsc406g00006 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 172 184 IPR033140 -
Stsc406g00006 332 Gene3D alpha/beta hydrolase 21 331 IPR029058 -
Stsc406g00006 332 Pfam alpha/beta hydrolase fold 90 309 IPR013094 GO:0016787
Stsc406g00006 332 SUPERFAMILY alpha/beta-Hydrolases 20 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc406g00006 Stsc-Chr406 40934 43047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc406g00006 19 330 Carbohydrate Esterase AT3G48700 47.077 1.29e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc406g00006 - - gmx:100801816 451.825