Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3g00057 ATGGCTTCAACCTCTCCTTCTCCAAATGCATCACCTTCTGCAATTCCTCCAGAATCTTCTGCTAATCCACCACCACCATCGTCATCATCTCCATCACCACCATCACCATCACCACCATCATCTCCATCTTCTCCATCTAAGCCAAATCAAACCTCTGATACACCTGCTCCTTCATCTCCTTCTACCCCTTCTTCAGCTTCACCTCCTTCTCCTTCAGTTCCTGCAACACCTCCTACCCCATCCCTTTCACCTCCACCATCATCTACTACACCTCCACCAACTCCATCCCCTCCTGCACCACCAGATTCTCCACCACCCTCACAACCAGCATCGCCTCCACCTTCAGTTGCAACCTCACCACCACCACCAGCAGCTGCCCTTCCCCCTGCCAAGACTTTGCCTTCAGTTCCAAGTTCATCCCCGCCGCCTCCCATAGCCAGTTCCCCTCCTCCTCAATCCTCACAAGCACCTCCTAAATCAATCCCACCTCCTTCTCAACCAGTTTCACCATCTCCTCCACCTCCAGCCAATGTGCCAAGGCCAACACCATCCGCCTCTTCTCCGCCGAAGGGAAAGCCACCAGAAAGTTCCCCTTTGCCTCCTTCGCCCCCTTCACAACATGCATCCCCTCCATCTGTTTCTAAACCTACTCCTTCCACTGATGCTCCCCCTCCATCAACATTGCCATCTACTCCTCCTGCGCCTCCTTCCAAAGATGTCCCCGCTCCATCCACATTGCCATCAACTCCTCCTACAGTGCCTTCGGCATCTTCTCCATCATCTTCGCCTCGTACCCCTGATAATAGAACAGCAACTGGGGCTCCAGCTGAGTCCTTACCCTCTTTTCCAACTGAGAAACCCACTGCTAAACCAACTAATGATGGAACCAATAGTGTAACCTCGAATACCCCATCTTCACACTCAAAAGGGTTAGGTACTGGAGGAGCTGTGGCTATTGGCATTATAGCTGGATTTTTTGTTCTCAGCCTTCTTGTTATGGCTGTGTGGTTTTCAAGGAAAAAGAAGAAGGGAACGGGACCAAAAGGTGGTTATACTTTGCCTTCGCCATTTCCCTCATCTCACAATTCAGGTACTTTATTCTTGAGGCCACAATCACCAGCCAACTACTTAGGTAGTGGTTCTGGTAGTGATTTTGTGTATTCACCATCAGAGCCAGGTGGTGTAAGTGGTTCAAGATCATGGTTCACATACGAAGAACTTATCCAAGCTACAGATGGTTTTTCTCCGAAAAATCTATTGGGAGAAGGTGGATTTGGTGCTGTCTACAAAGGTATTCTCTTTGATGGAAGAGTAGTGGCTGTAAAACAGCTTAAAATTGGTGGTTCGCAAGGGGAACGTGAATTTAGAGCAGAAGTTGAGACTATTAGCCGTGTACATCATCGCCATCTTGTTTCCCTGGTGGGCTATTGTATATCTGAGCATCAAAGATTGCTTGTCTATGACTATGTTGCTAATGACACACTTCATTACCATCTTCACGGTGAGAACAGACCAGTTTTGGATTGGCCTACCAGAGTCAAGGTTGGTGCCGGGGCTGCTCGAGGAATAGCATACCTACATGAAGACTGCCATCCACGCATTATTCATCGTGATATTAAGTCATCAAACATCCTGCTTGACAATAACTTTGAAGCTCAAGTTTCAGACTTTGGGCTTGCAAAATTGGCACTGGATTCAAATACACATGTTACTACCCGCGTGATGGGAACCTTTGGGTACATGGCACCAGAGTATGCAACGAGTGGAAAATTGACTGAAAAGTCTGATGTATATTCCTTCGGTGTGGTGCTTTTGGAGCTAATTACCGGTCGAAAGCCTGTCGATGTCTCTCAGCCGATTGGTGACGAGAGCCTGGTTGAATGGGCTCGGCCTCTGTTGATCGAAGCACTTGACAACGAGGACCTTGATATTTTGGTGGATCCAAGACTGGAAAAGAACTACAACAGAAATGAAATGTTCCGGATGATTGAGGCTGCTGCAGCCTGTGTTCGTCACTCGGCAATAAAGAGGCCACGGATGAGTCAGGTGGTAAGAGCTTTAGATTCCTTAGACGAATTTACTGATCTGAACAATGGAATGAGACCGGGGCAGAGTTCGGTCTTTGATTCTGGGCAACAATCTGCACAGATCAGAATGTTTAGAAGGATGGCTTTTGGGAGCCAAGATTACAGTTCCAGTTTCTTTAATGAGTCTCAAAGTAGCTGGATGAGTAGAGAGCAACATGACTCAACAACCATGAATAGATCCGGACCTAGGAATATTTGA 2286 0.4768 MASTSPSPNASPSAIPPESSANPPPPSSSSPSPPSPSPPSSPSSPSKPNQTSDTPAPSSPSTPSSASPPSPSVPATPPTPSLSPPPSSTTPPPTPSPPAPPDSPPPSQPASPPPSVATSPPPPAAALPPAKTLPSVPSSSPPPPIASSPPPQSSQAPPKSIPPPSQPVSPSPPPPANVPRPTPSASSPPKGKPPESSPLPPSPPSQHASPPSVSKPTPSTDAPPPSTLPSTPPAPPSKDVPAPSTLPSTPPTVPSASSPSSSPRTPDNRTATGAPAESLPSFPTEKPTAKPTNDGTNSVTSNTPSSHSKGLGTGGAVAIGIIAGFFVLSLLVMAVWFSRKKKKGTGPKGGYTLPSPFPSSHNSGTLFLRPQSPANYLGSGSGSDFVYSPSEPGGVSGSRSWFTYEELIQATDGFSPKNLLGEGGFGAVYKGILFDGRVVAVKQLKIGGSQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVANDTLHYHLHGENRPVLDWPTRVKVGAGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPIGDESLVEWARPLLIEALDNEDLDILVDPRLEKNYNRNEMFRMIEAAAACVRHSAIKRPRMSQVVRALDSLDEFTDLNNGMRPGQSSVFDSGQQSAQIRMFRRMAFGSQDYSSSFFNESQSSWMSREQHDSTTMNRSGPRNI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3g00057 761 FunFam proline-rich receptor-like protein kinase PERK8 490 702 - -
Stsc3g00057 761 MobiDBLite consensus disorder prediction 46 60 - -
Stsc3g00057 761 ProSitePatterns Protein kinases ATP-binding region signature. 420 442 IPR017441 GO:0005524
Stsc3g00057 761 MobiDBLite consensus disorder prediction 10 45 - -
Stsc3g00057 761 MobiDBLite consensus disorder prediction 285 310 - -
Stsc3g00057 761 Pfam Protein tyrosine and serine/threonine kinase 418 687 IPR001245 GO:0004672|GO:0006468
Stsc3g00057 761 MobiDBLite consensus disorder prediction 258 277 - -
Stsc3g00057 761 MobiDBLite consensus disorder prediction 61 257 - -
Stsc3g00057 761 Gene3D Transferase(Phosphotransferase) domain 1 490 702 - -
Stsc3g00057 761 Gene3D Phosphorylase Kinase; domain 1 393 489 - -
Stsc3g00057 761 PRINTS Proline rich extensin signature 5 26 - -
Stsc3g00057 761 PRINTS Proline rich extensin signature 27 43 - -
Stsc3g00057 761 PRINTS Proline rich extensin signature 47 64 - -
Stsc3g00057 761 PRINTS Proline rich extensin signature 66 91 - -
Stsc3g00057 761 MobiDBLite consensus disorder prediction 1 310 - -
Stsc3g00057 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Stsc3g00057 761 SMART serkin_6 414 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc3g00057 761 SUPERFAMILY Protein kinase-like (PK-like) 392 687 IPR011009 -
Stsc3g00057 761 FunFam Proline-rich receptor-like protein kinase PERK8 387 489 - -
Stsc3g00057 761 ProSiteProfiles Protein kinase domain profile. 414 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc3g00057 761 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 327 736 IPR047117 -
Stsc3g00057 761 MobiDBLite consensus disorder prediction 741 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3g00057 Stsc-Chr3 418185 422886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3g00057 310 733 Trihelix Transcription Factor Family AT1G70460 57.837 4.75e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Stsc3g00057 PK_Tyr_Ser-Thr 8.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3g00057 - - gmx:100784873 838.565