Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3g00039 ATGGACACGCGCCGAGCCCCACGCGCCGTCATTGACCCCAAGGTTCGCAAGGTCGGCTTCTTTGCTCCGCCTGAACCCTCACAATCGGCTCTTCCCGACCCGATCCCTCTTCCTTCCTCTTCACTTTCTCCCGTCATGATCCCTCCGCCGCGGCACTCGTCGGAAAATCTCCTTCCCCATGCTCGTCCGCCGGCGTCGGTTGTGTCAGGTGCATCTTCTGTTTCCATCGAAGGTTCCGTTGTTGCTGGCGGGAGTTACGGGAGCTCGTCCGAGCTCTTTCCAGCTCCTATGTCTCCGGCGTCGTCTTCGTATTCTTCCAGCAGGTTCGTTGGCGGTGGTGACGGTGATTACTTTTTAAATGGAGTTGCGGTGGCTTCGCCTGGTCGCGGCGGAGGGAAGACGGCGGCTTCGTTTCCTCGTGGTGGATTCGAGTTGCCGGAGGCTAAGGCTAGCAGCGTTCCGGCGAGCGAATTGACTACGGTCTCGGTGGTGAATGATTCCTCCCTAGGGATTCGAGAAAGAGATAAAGCAGATAATGGACGAGGATCAGCATTGGAAGTGAAAGACCAAACTGCAAATTCAAAGCAGAAGAAAGATAAGACAACAAAAGCTGAAAGACGTGCTCTTCAAGAAGCACAACGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTGTAACTTCTGGGAATGCAAAACCAGCTAAGGCCACAAAGCCCCCACAAAAAGTAGATAATGCTTCAGCTGCAGCCTCTGAGAAGAAGGGATGTGATCGTCCTCCAGAAAAGGATAGAAAGAAAGATGTTCCTCAACCACGCATGCAATATGATGATCAAAGCAGAGTGGAGAAAGCTAAACGGCGTGCTGTGGTAAAACAAACCGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTGCCACAGTATGAACATGGGAGTCTACTTCCAGATCTTGAGGCAAAATTTTTCCAGCTTGATACAGTTCATCCTGCAGTTTATAAGGCGGGCTTGCAATATCTGTCTGGCAATATATATGGCAGTAATGCTCGTTGCATTGCAATGCTTCAAGCATTTCAAGATGCCATCAGAGACTACCGAGTTCCACCAGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAAGTAGCTATGTTTCATTCCTCATTGAGTGTCGGCCTCTTTCTATCAGCATGGGAAATGCAATAAAATTTCTTAAAACTCGAATTGCTAAGCTACCTTTGACACTGTCTGAGTCAGAATCAAAAGCTTCTCTCCACTCAGATATTGAGCGTTTTATAAACGAGAAGATTATACTTGCTGACAAGGTGATAGTCAAGCACGCAGTAACAAAGATAAGAGATGGTGATGTGCTTCTTACTTATGGATTGTCATCAGCTGTTGAAATGCTACTGTTACATGCACATGATTTAGGAAAACAGTTCCGAGTTATAATAGTCGATTCTCGTCCACAGCTTAGAGGAAAAATTTTGCTTCGGAGGTTGGTGGAGAAAGGTCTTAGCTGTACATACACTCAAATAAATGCCCTTTCCTACATAATGCATGAAGTCACTCGGGTGTTTTTGGGTGCTTCATCAATTTTGTCAAATGGAACAGTTTATTCAGGAGTTGGGACTGCATGTGTTGCAATGATTGCTCATTCATTTCGTGTCCCTGTTTTAGTGTGTTGTGAGGCTTACAAATTTAATGAAAGGGTACAACTTGATTCAATATGCTCAAATGAACTTGGTGATCCAGAAGTCATATCCAAGGTTCTGGGTAGGGAAGATGTAAACTACTTGGACGGTTGGGCCAATACTGAAAATCTGCAACTTCTTAATCTGATTTATGATGCAACACCTTCAGATTATATTTCAATGATAGTCACAGATTATGGCATGGTCCCACCAACAAGTGTTCCTGTAATTGTAAGAGAATATAGGAGAGAACAGCTGTGGATATAA 1974 0.4559 MDTRRAPRAVIDPKVRKVGFFAPPEPSQSALPDPIPLPSSSLSPVMIPPPRHSSENLLPHARPPASVVSGASSVSIEGSVVAGGSYGSSSELFPAPMSPASSSYSSSRFVGGGDGDYFLNGVAVASPGRGGGKTAASFPRGGFELPEAKASSVPASELTTVSVVNDSSLGIRERDKADNGRGSALEVKDQTANSKQKKDKTTKAERRALQEAQRAAKAAAKAEGNKASGTVTSGNAKPAKATKPPQKVDNASAAASEKKGCDRPPEKDRKKDVPQPRMQYDDQSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSLLPDLEAKFFQLDTVHPAVYKAGLQYLSGNIYGSNARCIAMLQAFQDAIRDYRVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIKFLKTRIAKLPLTLSESESKASLHSDIERFINEKIILADKVIVKHAVTKIRDGDVLLTYGLSSAVEMLLLHAHDLGKQFRVIIVDSRPQLRGKILLRRLVEKGLSCTYTQINALSYIMHEVTRVFLGASSILSNGTVYSGVGTACVAMIAHSFRVPVLVCCEAYKFNERVQLDSICSNELGDPEVISKVLGREDVNYLDGWANTENLQLLNLIYDATPSDYISMIVTDYGMVPPTSVPVIVREYRREQLWI 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3g00039 657 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 38 654 - -
Stsc3g00039 657 MobiDBLite consensus disorder prediction 20 64 - -
Stsc3g00039 657 Pfam Initiation factor 2 subunit family 348 640 IPR000649 GO:0044237
Stsc3g00039 657 SUPERFAMILY NagB/RpiA/CoA transferase-like 304 650 IPR037171 -
Stsc3g00039 657 MobiDBLite consensus disorder prediction 153 167 - -
Stsc3g00039 657 MobiDBLite consensus disorder prediction 27 45 - -
Stsc3g00039 657 MobiDBLite consensus disorder prediction 128 294 - -
Stsc3g00039 657 Gene3D - 444 650 IPR042529 -
Stsc3g00039 657 MobiDBLite consensus disorder prediction 169 183 - -
Stsc3g00039 657 MobiDBLite consensus disorder prediction 191 212 - -
Stsc3g00039 657 MobiDBLite consensus disorder prediction 259 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3g00039 Stsc-Chr3 269042 273735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3g00039 1 657 Eukaryotic Initiation Factors Gene Family AT5G38640 63.289 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3g00039 K03680 - gmx:100785938 942.184