Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3g00002 ATGAATAGAGTTAGGGAGAATGAGTTGCAGCTTAATTGGGAAGTTAGGCTTAAAATCGCTGTTGGTGTTGTGAAGGGTCTTCAGTATCTTCACAATTGTGTTCCTCAAGTTCTACACAACAACTTGAAGCTCACAAATGTGATGGTGGATGCAGAGTTTGAACCGAAATTAGCAGATTATGGATTGGCTAAGCTTCTTCCAAACTTGGATAGAGGGACTAGTAGTCCTCCTGAATGTTTCCATAGTTGCAGCAGGTACACTGACAAAAGCGACATATTCAGTTTCGGCATGATACTCGGCGTTTTACTAAGTGGAAAGGACCCTACAGATCCATTCTTTGGGGAAGCAGCAAGTATGGGAAGCATGGGGGGTTGGCTAAGGCACTTGCAGCAGCAAGGCGATGCGAAAGAGGCTCTGGATAAGAGCATTCTGGGCGAAGAAGGCGAGGAAGATGAGATGCTAATGGCGGTGAGAATCGCTGCCGCATGCCTCTCTGATATGCCTGCAGAGAGGCCTTCTAGTGATGATCTTGCTCTCATGCTAACTCAACTCAACAGTTTTTAA 564 0.4574 MNRVRENELQLNWEVRLKIAVGVVKGLQYLHNCVPQVLHNNLKLTNVMVDAEFEPKLADYGLAKLLPNLDRGTSSPPECFHSCSRYTDKSDIFSFGMILGVLLSGKDPTDPFFGEAASMGSMGGWLRHLQQQGDAKEALDKSILGEEGEEDEMLMAVRIAAACLSDMPAERPSSDDLALMLTQLNSF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3g00002 187 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc3g00002 187 SUPERFAMILY Protein kinase-like (PK-like) 4 182 IPR011009 -
Stsc3g00002 187 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 183 - -
Stsc3g00002 187 Pfam Protein kinase domain 13 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc3g00002 187 Gene3D Transferase(Phosphotransferase) domain 1 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3g00002 Stsc-Chr3 9373 10673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3g00002 4 184 Receptor kinase-like Gene Family AT2G31880 36.979 2.32e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Stsc3g00002 Pkinase 4.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3g00002 - K12489 gmx:102664273 305.834