Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc39g00025 ATGAAGGGTCAAAGAGTTGGAGTTGGTGTAATGGTGGACTCATGTCAGGAATGTGAGTGTTGCGAGCAAGATCTCGAGAATCACTGTCCTGAACATGTGTTGACCTATAACTCTCCTTATAAAGGGACACAAACCCGCGGTGGCTACTCCGATTTAATCGTTGTACACCAGCGCTATGTGCTTTATTTTCCCAACGACCTACCCCTTGCTGCCGGTGCCCCGCTGCTGTGTGCTGGGATCACTGTGTACAGTCCAATGAAGTATTATGGGATGACAGAGCCGGGCAAGCATTTGGGAGTGGCTGGGCTTGGCGGCTTAGGCCACCTTGCTATCAAATTTGGCAAAGCATTTGGTCTCAAAGTTACTGTCATTAGTAGCTCTCCCAACAAGGAAGCTGAAGCCATTCACAATCTTGGTGCTGATTCTTTCATTCTTTCCTCTGATCCTGAAAAGATGAAGGCTGCTACCGGAACAATGGATTATATCATAGACACGATTCCTGCTGTTCATCCGCTGGGTCCCCTGCTTGATCTGCTGAAGCTGAACGGAAAGCTGGCCGTTGTGGCGCTGCCTGGCGGTGCTCTTCAGCTGCCTGTGTTTCCCCTGGTCATGGGAAGGAAGCTTGTAGGGGGAAGCTACTTTGGAGGGATGAAGGAGACTCAGGAGATGCTTGATTTCTGTGGAAAGCATAACATAACTGCAGATATTGAGCTGATTAAGATGAATGAGATCAACATTGCTATGGAAAGGCTCAGCAGAGGTGATGTTAAATATCGCTTTGTCATTAATATCTGGAACACCTTATCCTCCAGTAACATTTAG 822 0.4769 MKGQRVGVGVMVDSCQECECCEQDLENHCPEHVLTYNSPYKGTQTRGGYSDLIVVHQRYVLYFPNDLPLAAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHLAIKFGKAFGLKVTVISSSPNKEAEAIHNLGADSFILSSDPEKMKAATGTMDYIIDTIPAVHPLGPLLDLLKLNGKLAVVALPGGALQLPVFPLVMGRKLVGGSYFGGMKETQEMLDFCGKHNITADIELIKMNEINIAMERLSRGDVKYRFVINIWNTLSSSNI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc39g00025 273 CDD CAD1 3 262 IPR047109 GO:0016616
Stsc39g00025 273 Gene3D - 3 263 - -
Stsc39g00025 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 67 232 IPR036291 -
Stsc39g00025 273 SUPERFAMILY GroES-like 2 96 IPR011032 -
Stsc39g00025 273 Gene3D - 78 234 - -
Stsc39g00025 273 FunFam Cinnamyl alcohol dehydrogenase 78 234 - -
Stsc39g00025 273 Pfam Zinc-binding dehydrogenase 105 226 IPR013149 -
Stsc39g00025 273 PANTHER ALDEHYDE REDUCTASE 3 267 IPR047109 GO:0016616
Stsc39g00025 273 Pfam Alcohol dehydrogenase GroES-like domain 2 61 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc39g00025 Stsc-Chr39 140067 140995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc39g00025 2 268 Monolignol Biosynthesis Gene Families AT2G21730 65.185 1.24e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc39g00025 K00083 - gmx:100795575 384.8