Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc390g00005 ATGATTCAAAACATTATCCTGTTCCTCTTTTTCTTCCTTCTTCCCTTACTTGTATTCTTCTTAATCAAACCTTCTTCAAACAACACCAATGTCATACCAAAATCATACCCAATCATCGGCTCATACTTGTCACTCAGGGCCAACGCCCACCGCCGCATCCAGTGGCTCTCCGACGTGGTCCTTGCCTCCCCTGCCAACACCTTCACCTTCCGCCGTCTCTTGGGCACCCAGTCCATCTACACCGCTAACCCAGCCACCGTGCAGCACATCCTCAAGAACAACTTCCCCAATTACCGAAAAGGCTCTATCTTCGTCGGAACACTCTCCGATTTCCTCGGCAACGGAATATTCAACACCAACGGCGAGGACTGGAAGTTCCAGAGACAAGTCGCCAGCCACGAGTTCAACACGAAATCGCTCCGCAACTTCGTGGAGAACGTGGTGGACACAGAACTCTCCGATCGACTCCTCCCCATCCTGTCCGGCGCAGCCGCAAAGCAGGAAGAAATCCTGGATTTGGAAGATATCCTTCAGAGATTTGCGTTTGACAACATCTGCAGAATCGCGTTCGGGTACGACCCTGAGTACCTGAATATATCATTTGAAAGAAGCAAGTTCGCGGAGGCATACCAAGAAGCAACCGAGATCAGCAGTTTACGGTTTCGCGAAGCCTTACCGATGGTATGGAAGCTTAAGAGAGCCCTCAACATTGGATCTGAGAGGCGATTGCGAATTGCTGTATCTCATGTGCGTGATTCTGCCAACAAACTCGTAAGGGAGAAGAAAAAGGAGCTCCAAGAGAACTCATCGCTTAAATCAATGGACATGCTCTCGCGCTTCTTGAGCTCGGGTCATTCTGACGAGGACTTCGTCACTGACATAGTCATAAGCTTCATTCTCGCGGGAAAGGATACCACCTCGGCGGCCCTCACGTGGTTCTTCTGGCTGTTATGGAAGAACCCTCGTGTGGAGAAGGAGATCGTGAAAGAGATAAACGAGAAATCAGAAGCTCCGGTTTACGATGAAGTGAAGGAGATGGTGTACACGCACGCTGCCTTGTGTGAGAGCATGAGGCTGTACCCTCCGGTTCCCACAGACAGCAAGGAGGCTGTGAACGACGACGTTTTGCCGGACGGGACTCCTGTCAAGAAGGGAATGATGGTGACGTATCATGTTTACGCCATGGGGAGGATGGAAAGCATTTGGGGTCCTGATTGGGCGGAGTTTAGGCCTGAGAGGTGGTTGGAGAGAGTTGAAGGAGGCGAATCGTGGCGGTTCGTGGCGAGGGATTCTTTCAGCTATGCTGTGTTTCAAGCAGGTCCCAGGATTTGCTTGGGGAAGGAAATGGCATTTATGCAGATGAAGAGGGTGGTGGCTGGGGTTCTTAGGAGGTTTAGGGTGGTTCCTGCGGCGGCTGAAGGAGTTGAACCGGAGTTCATTTCCTTCCTTACCTCTCAGATGAAAGGTGGTTTTCCTGTTAAGATTGTTCAAAGACAAGTTTGA 1503 0.507 MIQNIILFLFFFLLPLLVFFLIKPSSNNTNVIPKSYPIIGSYLSLRANAHRRIQWLSDVVLASPANTFTFRRLLGTQSIYTANPATVQHILKNNFPNYRKGSIFVGTLSDFLGNGIFNTNGEDWKFQRQVASHEFNTKSLRNFVENVVDTELSDRLLPILSGAAAKQEEILDLEDILQRFAFDNICRIAFGYDPEYLNISFERSKFAEAYQEATEISSLRFREALPMVWKLKRALNIGSERRLRIAVSHVRDSANKLVREKKKELQENSSLKSMDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLWKNPRVEKEIVKEINEKSEAPVYDEVKEMVYTHAALCESMRLYPPVPTDSKEAVNDDVLPDGTPVKKGMMVTYHVYAMGRMESIWGPDWAEFRPERWLERVEGGESWRFVARDSFSYAVFQAGPRICLGKEMAFMQMKRVVAGVLRRFRVVPAAAEGVEPEFISFLTSQMKGGFPVKIVQRQV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc390g00005 500 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS E-class P450 group IV signature 428 444 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS E-class P450 group IV signature 397 415 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS E-class P450 group IV signature 346 362 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS E-class P450 group IV signature 444 462 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PRINTS E-class P450 group IV signature 292 318 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 PANTHER CYTOCHROME P450 20 493 - -
Stsc390g00005 500 Gene3D Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc390g00005 500 CDD CYP86A 67 491 - -
Stsc390g00005 500 SUPERFAMILY Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc390g00005 Stsc-Chr390 26534 28272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc390g00005 1 499 Cytochrome P450 AT5G63450 47.535 1.44e-155 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc390g00005 K20769 K13407 gmx:100817669 723.005