Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc386g00001 ATGAAGAAGAATGAGAGTGGTGGTTATGTGAGGGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTACAAAGGCACCTGAGCAGAGCATGGACGATGGAAAAGAACAAAGAGAAGCAGCAGCAAGAAGATGATGCTGCTATGGCTGCTGCTGCTGCTGCGGCCGCTGCTGCTGAAGGAGCAAGGTCATCATCAAGAACAAGGCAAGAATGGGAGATTGACCCTTCCAAGCTCATAATCAAGTCTGTCATTGCTCGTGGAACTTTTGGCACTGTTCATCGTGGTGTTTATGATGGCCAAGATGTTGCAGTTAAGCTTCTTGACTGGGGGGAAGAGGGCCATCGATCCGAAGCCGAAATAGCTTCTCTGAGGGCAGCTTTTACACAAGAAGTTGCTGTTTGGCATAAGCTTGACCATCCTAATGTAACCAAGTTTATCGGGGCGACAATGGGAACATCGGATCTGCAGCTACAAACCGAGAATGGTCATATAGGCATGCCGAGCAACCTGTGTTGTGTTGTGGTTGAGTATTGTCCGGGGGGTGCACTGAAGTCTTATCTCATAAAAAATCGGCGAAGGAAGCTGGCTTTTAAAGTGGTTGTCCAACTGGCACTTGACCTTGCAAGAGGTTTGAGTTATCTCCACATGAAGAAGATTGTTCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACGCGAACCTTGAAGATAGCTGATTTCGGTGTAGCTCGCATTGAGGCTTCCAATCCACATGACATGACTGGTGAAACCGGAACCCTCGGTTATATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGTGACGTGTACAGTTTCGGTATATGCTTATGGGAGATCTACTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCAGAAGTGACATCCGCTGTCGTAAGACAGAATCTGAGGCCGGAGATTCCGCGGTGTTGTCCAAGCTCTCTGGCAAATGTGATGAAGAGATGCTGGGATGCCAATCCCGACAAGCGGCCAGAGATGGACGAAGTGGTGTCGATGCTGGAAGCTATCGACACCTCAAAGGGCGGGGGTATGATCCCTGTTGATCAACCTCAGGGTTGTTTATGTTTCCGCAGGTATCGAGGACCTTGA 1149 0.4804 MKKNESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKQQQEDDAAMAAAAAAAAAAEGARSSSRTRQEWEIDPSKLIIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSDLQLQTENGHIGMPSNLCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHMKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQPQGCLCFRRYRGP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc386g00001 382 Gene3D Transferase(Phosphotransferase) domain 1 179 365 - -
Stsc386g00001 382 SMART serkin_6 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc386g00001 382 SUPERFAMILY Protein kinase-like (PK-like) 66 353 IPR011009 -
Stsc386g00001 382 Gene3D Phosphorylase Kinase; domain 1 67 162 - -
Stsc386g00001 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Stsc386g00001 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 356 - -
Stsc386g00001 382 MobiDBLite consensus disorder prediction 31 45 - -
Stsc386g00001 382 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672|GO:0006468
Stsc386g00001 382 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Stsc386g00001 382 PRINTS Tyrosine kinase catalytic domain signature 176 189 IPR001245 GO:0004672|GO:0006468
Stsc386g00001 382 PRINTS Tyrosine kinase catalytic domain signature 324 346 IPR001245 GO:0004672|GO:0006468
Stsc386g00001 382 CDD STKc_MAP3K-like 85 353 - -
Stsc386g00001 382 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc386g00001 382 FunFam Serine/threonine-protein kinase HT1 179 364 - -
Stsc386g00001 382 FunFam Kinase suppressor of Ras 1 68 163 - -
Stsc386g00001 382 MobiDBLite consensus disorder prediction 31 54 - -
Stsc386g00001 382 Pfam Protein tyrosine and serine/threonine kinase 81 353 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc386g00001 Stsc-Chr386 7191 11714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc386g00001 8 314 MAP Kinase Kinase Kinase AT5G50000 82.051 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc386g00001 PK_Tyr_Ser-Thr 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc386g00001 - - gmx:100806635 711.835