Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc385g00009 ATGGCAAACTTCAATATTCTTATACCAATTATCACTTTCTACCTTCTTCTCTTTCCAATCTCCAAAACCATAGCAGAAACTGATACCATCACTAACTTGCACTCTCTAAGTAAAAACCAGACCTTAGTTTCCAAGAATGGACAATTTGAACTTGGTTTCTTCACTCTTGACAACTCTACCAACCATTATTACCTTGCCATTTGGTACAAGAAAATCCCACTCCAAACCATTGTGTGGGTTGCAAACCGTGAAAAACCCGCCACAAATCCCAACTCTCTTCAATTGATTATTAACAACACACTTCTCCTTGGTCAAGACAACAAAACTGTTCTATGGTCTGTGAACATTACAAGAAAGCTAAAGAATCCAATTCTGCAACTCTTGGATTCAGGGAACCTTGTTCTAAGAGAAGACAATGAAGAGAATAAGTATCTATGGCAAAGCTTTGACTACCCTGGCAATACACTCTTGCCAGGGATGAAGCTTGGTAAGGATTTAAGGACAGGTTTCGAAAGGCGCTTAACGGCGTGGAAGAACGAGAAAGATCCTTCACCGGGAACCTTGAGTTGGGAAATGGATGTGACTGTGTGGCCAGAACCAATGCAGAGAATAGGATCAATGAAACAGTTCAGCACAGGAGCTTGGAATGGACTAGACTATGCTAGCAAACCAACCAGAAAGAACTTACCATTTTTCAGTTTTGTTTACTTTTCCAGTCAGGATGAAGTCTACTTTGCATTCAACCTTGAAAATAACTCAGTTCCTGGGAGGATAGTGTTGGATCAACCCTCCTACAGGCGTCTCTATTTGGCTTGGACTGACAAACAATGGGTGATCTTTAATTCACTGCCAAGAGTCTTTTGTGAGAGATATAGTGTTTGTGGTGCTAATTCCCATTGTGACTGGAGCAAGTCCGAAATTGATGCTTGTGATTGTTTGAGAGGCTTTAGGCCTAACCATACCGGAGGTTGCTTGCGCGACAAGCCACTGAATTGCGAAAGCGATGGGTTTGTTAAGTATGTGAAGATGAAAGTGCCTGATACTGAGAATTGCTGGTACTTGAATCAGAGCATGAACCTTGATGAGTGCAGAGAGAAATGCTTGAGGAATTGTTCTTGTACGGCTTATGCGAATTCGGATATTAGAGGGGAAGGTAGTGGCTGTGCTTTGTGGTCTGGTGATCTTTATGATCTGAGGATTTTACCGGATGCAGGCCAAGATTTGTACATTAGAGTGCCAGCTTCAGAGTTAGCATTAATAGATCGTTCCAAGGAAGAACAAGAGGAGGATCCAGAGGTCCCATTGTATGACCTATCAGTCATAGCTTCTTCCACTGATAACTTTTCAGACAAAAACAAGCTTGGAGAAGGTGGATTTGGATCTGTGTTTAAGGGAACATTGGAAAATGGACAAAGAATAGCAGTTAAGAGGCTCTCTACTGGTTCTGGACAAGGGATCAAAGAATTCAAGAATGAAATTGCATTAATTGCGAAACTTCAGCACCGTAATCTTGTCAAGCTGCAAGGATATTGCATTCAGAATAAAGAGAAATTGCTTATATATGAATATATGCCTAATAAGAGCTTGGATTTCTTTATATTTGATCAAACACAAAGAATGGTTTTGGATTGGCCTACAAGATTCGATATTATTTGTGGGATAGCGAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACTTACAGTTATTCATAGAGATCTCAAAGCAAGTAACGTTTTACTTGACGACGAGATGAATCCAAAGATCTCGGACTTTGGTTTAGCTCGAATTTTGGGAGGAGACCAGACCACAGAAATGACACGCCGTGTCGTTGGAACATATGGATACATAGCACCGGAATATGCAATAGATGGTAACTTTTCAGTAAAGTCAGATGTCTTTAGCTTCGGTGTTTTGTTGCTGGAGATAGTATCGGGAAAGAAAAACAGAGGAGATGAACATCTAAACGAAAATACAAATCTTGTTGGATATGCATGGAAGTTGTGGATGGAAGGGAGGCCTTTAGAGTTGATAAGTGAAGACATAAAAGAATCATGCAATGGGTCTGAAGCATTGAGATGCATCCATATAAGTTTTCTGTGTCTTGAGCAGCATCCACATGATAGGCCATGCATGTCATCTGTGGTTACCATGTTAGGCAGTGAAATTTGCTTGCCTAAACCAAAACAGCCAGCTCTTTTTGTTGGAGAATATTCTTCATCAAATAAGACTAATTTAGCTTCTGTTAATGAATTAAGTACGTCCATTTTAGAAGCTCGTTAG 2283 0.403 MANFNILIPIITFYLLLFPISKTIAETDTITNLHSLSKNQTLVSKNGQFELGFFTLDNSTNHYYLAIWYKKIPLQTIVWVANREKPATNPNSLQLIINNTLLLGQDNKTVLWSVNITRKLKNPILQLLDSGNLVLREDNEENKYLWQSFDYPGNTLLPGMKLGKDLRTGFERRLTAWKNEKDPSPGTLSWEMDVTVWPEPMQRIGSMKQFSTGAWNGLDYASKPTRKNLPFFSFVYFSSQDEVYFAFNLENNSVPGRIVLDQPSYRRLYLAWTDKQWVIFNSLPRVFCERYSVCGANSHCDWSKSEIDACDCLRGFRPNHTGGCLRDKPLNCESDGFVKYVKMKVPDTENCWYLNQSMNLDECREKCLRNCSCTAYANSDIRGEGSGCALWSGDLYDLRILPDAGQDLYIRVPASELALIDRSKEEQEEDPEVPLYDLSVIASSTDNFSDKNKLGEGGFGSVFKGTLENGQRIAVKRLSTGSGQGIKEFKNEIALIAKLQHRNLVKLQGYCIQNKEKLLIYEYMPNKSLDFFIFDQTQRMVLDWPTRFDIICGIARGLLYLHQDSRLTVIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTTEMTRRVVGTYGYIAPEYAIDGNFSVKSDVFSFGVLLLEIVSGKKNRGDEHLNENTNLVGYAWKLWMEGRPLELISEDIKESCNGSEALRCIHISFLCLEQHPHDRPCMSSVVTMLGSEICLPKPKQPALFVGEYSSSNKTNLASVNELSTSILEAR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc385g00009 760 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Stsc385g00009 760 SMART ntp_6 332 412 IPR003609 -
Stsc385g00009 760 CDD PAN_AP_plant 329 413 - -
Stsc385g00009 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Stsc385g00009 760 SUPERFAMILY Protein kinase-like (PK-like) 431 739 IPR011009 -
Stsc385g00009 760 Gene3D Transferase(Phosphotransferase) domain 1 524 725 - -
Stsc385g00009 760 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 183 IPR036426 -
Stsc385g00009 760 CDD STKc_IRAK 454 719 - -
Stsc385g00009 760 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Stsc385g00009 760 SMART serkin_6 448 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc385g00009 760 Gene3D Phosphorylase Kinase; domain 1 415 523 - -
Stsc385g00009 760 ProSitePatterns Protein kinases ATP-binding region signature. 454 476 IPR017441 GO:0005524
Stsc385g00009 760 CDD B_lectin 35 152 IPR001480 -
Stsc385g00009 760 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Stsc385g00009 760 Gene3D - 21 149 IPR036426 -
Stsc385g00009 760 SMART blect_4 33 152 IPR001480 -
Stsc385g00009 760 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Stsc385g00009 760 Pfam Protein tyrosine and serine/threonine kinase 451 719 IPR001245 GO:0004672|GO:0006468
Stsc385g00009 760 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 524 727 - -
Stsc385g00009 760 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 709 - -
Stsc385g00009 760 PIRSF SRK 1 425 IPR024171 GO:0004674
Stsc385g00009 760 PIRSF SRK 418 760 IPR024171 GO:0004674
Stsc385g00009 760 Pfam D-mannose binding lectin 76 178 IPR001480 -
Stsc385g00009 760 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 414 523 - -
Stsc385g00009 760 Pfam PAN-like domain 332 398 IPR003609 -
Stsc385g00009 760 ProSiteProfiles Protein kinase domain profile. 448 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc385g00009 Stsc-Chr385 39275 42210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc385g00009 437 735 Receptor kinase-like Gene Family AT4G23230 58.333 3.24e-122 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc385g00009 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc385g00009 - - ahf:112769120 1112.06