Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc385g00004 ATGCCACTAGTAACTTTCTACCTTCTCTTTTTGGTCTCAAGAATTGTTTCAGCAACTGATACCATAACTCAATCACACTCTCTAACTGAAAACCAAACACTGCTTTCCAACAATCAAAACTTCCAATTCGGTTTCTTCACTCTTCCAATAAACTCTACAAACCGTTACCTTGGGATTTGGTACAACAAGATACCGGCTCAAACAGTTGTATGGCTTGCAAACCGGGAAAAACCACTCACAACAGGAGTTTCTGCAGTCTTGATGATGAACAACACACTTATCCTCCATCAGAATAACTCTGTTATATGGTCTATAACTCCCGCTAGACGAGCTCGAAATCCGGTTCTTCAGCTATTGGATTCTGGAAACCTTGTTTTGAGAGAAGAGAATGATGAGAATGAAGAGAATTATCTATGGCAGAGTTTTGATTACCCTTGTGACACACTCTTGCCAGGGATGAAGCTTGGGAAGGATTTAAGGACTGGATTCGATAGGCGAGTAACGGCGTGGAAGAATGAGGATGATCCTTCAATAGGGACATTGTCTTGGGGAATGGATGTTACCAATTGGCCTCAACAAATGCAGAGAGTAGGATCAATGAAGCAGCACAGAAGAGGCTCTTGGAATGGGATTGACTACACTGGCAGACCAACCATAAGGCCTAGTCCGGTTTTCGAGTTCAAGTACTTTGCTGATGAGGAGCAGGTCTACTTCATGTTTAGCCTTGTGAATAGCTCTGTCAAAGCTAGGATGGTGCTGAATCAGAGCAGCTATAAGCTCCTGCATTTGGCATGGGACGAGGCGGCGCGAGGATGGAAGGTTTATGGCTTGTTGCCAAGAGATTTTTGTGATGAGTATGGTGCTTGTGGTCCTAATGGTAATTGTGATGTTAGCAAGTTACCATATGCTTGTGATTGTTTGAGAGGGTTTAGGCCTAAGTCTTCAAAAGATTGGAATGAAATGAACTACCAAGGAGGTTGCTTGCGTGACAAGCCACTGAATTGCGAAAGCGATGGGTTTATTAAGTATGGTAAGATGAAAGTTCCTGATACTGAGAATTGTTGGTACTTGAATCAGAGCATGAACTTGGAGGAGTGCAGAGAGAAATGCTTGAGGAATTGTTCTTGTATGGCTTATACGAATTCGGATATTCGAGGAGAAGGCAATGGTTGTGCTTTGTGGTCTGGTGATCTTAATGACTTGAGGGTTCAACCAGATGCAGGCCAAGATCTATATGTTAGAGTGCCAGCTTCAGAATTAGATACAAACAATGGAGACAAGTTGAAGATAGGAATTGCAGTTGGTGGCACTATTGCAGCAATATTAGGTGGATTACTGTTAACTCTTTATTTCATATTCATAAGAGGAAGGAGTGCAACAATGAAAAAGAGTGCAGCAGCAGTAGTAGATCATTTCAAGGAAGAAGAACAGGAAGACGATTTGGAGCTTCCCTTGTTTGATCTATCTAGTATAGTTAGTGCTACTGACAACTTTTCAATCAACAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAATATTGGAAAACGGAGAAGAAATTGCTGTCAAGAGACTTTCTAGAGGCTCAAAACAAGGTGTCAAGGAATTTAAAACCGAAGTTGCGTTGATAGCTAAACTTCAACACCGGAATCTTGTAAAGCTTCATGGATCCTGCATTCAAGACCAAGAGAAACTGCTTGTATACGAATATATGCCTAACAAAAGCTTAGATTTATTCATATTTGATCAGACCCAACGGATGTTATTGGATTGGTCTAAGCGATTCAACATTATTTGCGGAATTGCTAAGGGTCTTCTTTATCTTCATCAAGACTCAAGACTTATAATTATTCATAGAGATCTCAAAACGAGTAATGTATTGTTGGATAGCGAGATGAATCCTAAGATCTCAGATTTCGGGTTGGCTAGAATTTTAGAAGGGGACCAAACTCCAGAAACTACGCGCGTGGTTGGAACTTATGGATATATGGCACCGGAATATGCCTTAGACGGAAACTTCTCAGTAAAATCAGATGTCTATAGCTTCGGCGTTTTATTGCTAGACATAATATCCGGAAAGAAAAACAAAGGAAGTCATCGCCAAAAAGATGGCAAAAACCTTATTGAATATGCATGGAATTTCTGGACAGAAGGGAGGCCCTTGGAATTGATTGATGAATACATCAAAGAGTGTTGCAATGTCTCTGAAGCATTAAGATGCATCCAAATTGGTCTTTTGTGTGTGCAACAGAATCCACATGATAGACCAAACATGTCGTTTGTTGTTATGATGTTAGGAAGTGAAATTGAATTGGCTCTTCCAAAAGAACCAGCTCTATTTGTTGGAAAATATTCATGTCAGGAATATTCTTCTTCATGTATGAATGATGCACCTTCTGTTAATGAGTTAAGTATCTCAGATTTAGAAGCTCGTTAG 2445 0.4041 MPLVTFYLLFLVSRIVSATDTITQSHSLTENQTLLSNNQNFQFGFFTLPINSTNRYLGIWYNKIPAQTVVWLANREKPLTTGVSAVLMMNNTLILHQNNSVIWSITPARRARNPVLQLLDSGNLVLREENDENEENYLWQSFDYPCDTLLPGMKLGKDLRTGFDRRVTAWKNEDDPSIGTLSWGMDVTNWPQQMQRVGSMKQHRRGSWNGIDYTGRPTIRPSPVFEFKYFADEEQVYFMFSLVNSSVKARMVLNQSSYKLLHLAWDEAARGWKVYGLLPRDFCDEYGACGPNGNCDVSKLPYACDCLRGFRPKSSKDWNEMNYQGGCLRDKPLNCESDGFIKYGKMKVPDTENCWYLNQSMNLEECREKCLRNCSCMAYTNSDIRGEGNGCALWSGDLNDLRVQPDAGQDLYVRVPASELDTNNGDKLKIGIAVGGTIAAILGGLLLTLYFIFIRGRSATMKKSAAAVVDHFKEEEQEDDLELPLFDLSSIVSATDNFSINNKLGEGGFGPVYKGILENGEEIAVKRLSRGSKQGVKEFKTEVALIAKLQHRNLVKLHGSCIQDQEKLLVYEYMPNKSLDLFIFDQTQRMLLDWSKRFNIICGIAKGLLYLHQDSRLIIIHRDLKTSNVLLDSEMNPKISDFGLARILEGDQTPETTRVVGTYGYMAPEYALDGNFSVKSDVYSFGVLLLDIISGKKNKGSHRQKDGKNLIEYAWNFWTEGRPLELIDEYIKECCNVSEALRCIQIGLLCVQQNPHDRPNMSFVVMMLGSEIELALPKEPALFVGKYSCQEYSSSCMNDAPSVNELSISDLEAR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc385g00004 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 176 IPR036426 -
Stsc385g00004 814 CDD PAN_AP_plant 332 416 - -
Stsc385g00004 814 CDD STKc_IRAK 504 768 - -
Stsc385g00004 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 759 - -
Stsc385g00004 814 ProSiteProfiles PAN/Apple domain profile. 335 416 IPR003609 -
Stsc385g00004 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 573 - -
Stsc385g00004 814 Pfam PAN-like domain 335 401 IPR003609 -
Stsc385g00004 814 SMART serkin_6 498 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc385g00004 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 776 - -
Stsc385g00004 814 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
Stsc385g00004 814 CDD B_lectin 25 145 IPR001480 -
Stsc385g00004 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 142 - -
Stsc385g00004 814 Pfam Protein kinase domain 499 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc385g00004 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Stsc385g00004 814 Pfam D-mannose binding lectin 68 171 IPR001480 -
Stsc385g00004 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Stsc385g00004 814 ProSiteProfiles Protein kinase domain profile. 498 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc385g00004 814 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
Stsc385g00004 814 Gene3D Phosphorylase Kinase; domain 1 458 573 - -
Stsc385g00004 814 SMART blect_4 25 145 IPR001480 -
Stsc385g00004 814 Gene3D - 13 142 IPR036426 -
Stsc385g00004 814 SUPERFAMILY Protein kinase-like (PK-like) 482 783 IPR011009 -
Stsc385g00004 814 SMART ntp_6 335 415 IPR003609 -
Stsc385g00004 814 ProSiteProfiles Bulb-type lectin domain profile. 19 139 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc385g00004 Stsc-Chr385 10987 14017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc385g00004 445 814 Receptor kinase-like Gene Family AT4G23140 50.131 2.35e-121 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc385g00004 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc385g00004 - - aip:107610641 1143.26