Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc38430g00001 ATGGCTACAATCACAGTATGGCTTGAAGTTGAATCTCAACAATATGATCAGCCAGCTTCAAAGCTTCTATGGGAGCTTCATTATAAGCAACTCTTTGGAATCCCAACAGACCCAAAAGCTGTTGAAGAGAATGAAGCTAAGCTTAGTGTTGTTCTTGGAATCTATGAGAAGAGGCTCTCTGAATCAAAGTACTTGGGTGGTGATTCTTTCACTTTGGCTGATCTTCATCACCTTCCATCCCTTCATTTCTTGATGTTAACGCAGGTCAAGAAGCTGGTTGAGCCGCTGCCACGTGTCAGTGCTTGGGTGGCTGATATTTCGGCTAGACCATCTTGGTCTAAGGTCACTTCCATGCTCAATTAA 363 0.4353 MATITVWLEVESQQYDQPASKLLWELHYKQLFGIPTDPKAVEENEAKLSVVLGIYEKRLSESKYLGGDSFTLADLHHLPSLHFLMLTQVKKLVEPLPRVSAWVADISARPSWSKVTSMLN 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc38430g00001 120 FunFam Glutathione S-transferase F2 1 116 - -
Stsc38430g00001 120 SUPERFAMILY GST C-terminal domain-like 2 115 IPR036282 -
Stsc38430g00001 120 CDD GST_C_Phi 1 115 IPR034347 -
Stsc38430g00001 120 Gene3D - 1 120 - -
Stsc38430g00001 120 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 117 - -
Stsc38430g00001 120 Pfam Glutathione S-transferase, C-terminal domain 30 110 IPR004046 -
Stsc38430g00001 120 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 120 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc38430g00001 Stsc-Chr38430 301 778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc38430g00001 2 118 Glutathione S-transferase Gene Family AT2G47730 55.556 3.22e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc38430g00001 K00799 - gmx:100799868 169.088