Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc377g00003 | ATGGAGACTATGTATAGATTGAATGTTGGTGGTCCTGAGATTCAACCTGATCAAGATCCTGATCTTTGGAGAAGTTGGGAAATGGATTCTCACTATATGATCACTGAAAATGCTGGGATAGGAATTAAAAACACTTCCAATATCACTTATGCTTCTGTGAATGATACTTCAGTGGCTCCTCTACTTGTATATGAAACTGCAAGGGCAATGTCAAACACAGAAGTCTTGGACAAGAGATTTAACATGTCCTGGAAATTCGAAGTGGATCCCGATTTTGATTATTTGGTCCGGTTACATTTCTGCGAGTTGGTTTATGATAAGGCGAACGAGAGGATTTTCAAGATCTACATAAATAACAGGACTGCTGCAGATAATGTTGATGTTTATGTTCAAGCAGGTGGGAAGAATAAAGCATATCACGTGGACTATTTCGATGCCATGTCCTCGAGCATTGATACACTATGGGTTCAACTAGGTCCTGATGCAGGTGCTGGTGCTGCGGGAACTGATGCTCTCTTGAATGGACTAGAGATCTTCAAGCTTAGTCGAAATGGGAACCTAGCATATGTGGATAAACATGACTCAGTTGGCAATGCAGCAAGCAAATCAAAAGTTCTTTGGGTTGGAATTGGAGCAGGTCTAGCTTCTATTGCTGTAATTGCTGTTATAGTTGTTCTTGTTTTCTGTTTCTGCAGAAGCTGGCAGAACAAATCAAGTGACACCAAAAACAACTCTCCTGGTTGGCGACCTTTGTTCCTCGTTGGGGCCACTGTGAACAGCACCATGGCCGCGAAGGGATCATCAGGAAGTCAAAAAGCATATGGATCTGTGGTCTCAACAAGAGCTGGCAAGCACTTTACATTGGCTGAAATCATTGCTGCAACAAAAAATTTTGATGAGAGCTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGGGAGATTGACGGTGGTGTCCTTGCTGCAATCAAGCGAGCCAACCCGCAATCTGAGCAAGGCTTGGCCGAATTTGAGACAGAAATTGAGATGCTCTCCAAACTCAGGCATAGGCATCTTGTTTCCTTGATTGGTTTCTGCGAAGAAAAAAACGAAATGATTCTGGTTTATGAGTATATGTCCAATGGAACTCTTAGAAGCCACTTGTTTGGGAGTGATCTTCCTCCATTAACTTGGAAGCAGCGCCTCGAGGTGTGCATTGGTGCTGCTAGGGGACTTCACTACCTACATACAGGAGCCGAACGCGGTATAATTCACAGGGATGTCAAGACAACCAACATATTGCTGGATGAGAAATTTGTAGCCAAAATGGCCGATTTTGGTTTGTCGAAAGATGGACCGGCTTTGGACCATACGCATGTTAGCACAGCTGTGAAGGGAAGCTTTGGCTATCTAGACCCCGAGTACTTCAGGAGACAGCAATTGACTGAGAAATCGGATGTTTACTCTTTCGGGGTCGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATCAATCCAACCTTGCCTAAAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCACTTGAAACAATCATTGATCCTCATCTTAGAGGAAACTATTGTCCGGAATCCTTGTCGAAGTTTGGGGAGATAGCCGAGAAATGTCTCGCCGACGATGGGAAGAGCAGGCCAACCATGGGGGAGGTGTTGTGGCACTTAGAATATGTGTTGCAGCTACATGAAGCTTGGTTGAACAGGGACAGTATTGTAACTTCCTTCTCTAGTACTAGTAGCCAAGATTTGAGAGGTGCAAAAGATGGAGGACTAGAATTGGTGCATGAGACTTCAAGTCAAGATGAAGAAAATGAATGA | 1857 | 0.4383 | METMYRLNVGGPEIQPDQDPDLWRSWEMDSHYMITENAGIGIKNTSNITYASVNDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYLVRLHFCELVYDKANERIFKIYINNRTAADNVDVYVQAGGKNKAYHVDYFDAMSSSIDTLWVQLGPDAGAGAAGTDALLNGLEIFKLSRNGNLAYVDKHDSVGNAASKSKVLWVGIGAGLASIAVIAVIVVLVFCFCRSWQNKSSDTKNNSPGWRPLFLVGATVNSTMAAKGSSGSQKAYGSVVSTRAGKHFTLAEIIAATKNFDESLVIGVGGFGKVYKGEIDGGVLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMSNGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDEKFVAKMADFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLETIIDPHLRGNYCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNRDSIVTSFSSTSSQDLRGAKDGGLELVHETSSQDEENE | 618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc377g00003 | 618 | CDD | STKc_IRAK | 304 | 569 | - | - | |
Stsc377g00003 | 618 | FunFam | Receptor-like protein kinase FERONIA | 1 | 183 | - | - | |
Stsc377g00003 | 618 | SMART | serkin_6 | 298 | 571 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc377g00003 | 618 | Pfam | Malectin-like domain | 2 | 180 | IPR024788 | - | |
Stsc377g00003 | 618 | MobiDBLite | consensus disorder prediction | 592 | 618 | - | - | |
Stsc377g00003 | 618 | ProSitePatterns | Protein kinases ATP-binding region signature. | 304 | 326 | IPR017441 | GO:0005524 | |
Stsc377g00003 | 618 | FunFam | Receptor-like protein kinase FERONIA | 374 | 588 | - | - | |
Stsc377g00003 | 618 | Gene3D | - | 1 | 182 | - | - | |
Stsc377g00003 | 618 | Pfam | Protein tyrosine and serine/threonine kinase | 303 | 566 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc377g00003 | 618 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 418 | 430 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc377g00003 | 618 | FunFam | receptor-like protein kinase FERONIA | 261 | 373 | - | - | |
Stsc377g00003 | 618 | MobiDBLite | consensus disorder prediction | 601 | 618 | - | - | |
Stsc377g00003 | 618 | Gene3D | Phosphorylase Kinase; domain 1 | 257 | 373 | - | - | |
Stsc377g00003 | 618 | ProSiteProfiles | Protein kinase domain profile. | 298 | 570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc377g00003 | 618 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 570 | IPR011009 | - | |
Stsc377g00003 | 618 | Gene3D | Transferase(Phosphotransferase) domain 1 | 374 | 588 | - | - | |
Stsc377g00003 | 618 | PANTHER | OS07G0166700 PROTEIN | 284 | 575 | IPR045272 | GO:0004714|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc377g00003 | Stsc-Chr377 | 15279 | 17440 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc377g00003 | 1 | 593 | Receptor kinase-like Gene Family | AT1G30570 | 70.756 | 0.0 | 900 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Stsc377g00003 | PK_Tyr_Ser-Thr | 5.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc377g00003 | - | - | gmx:100791403 | 1036.56 |