Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc376g00010 ATGAAAACAAATGATGATACTGAAGGTGTATTAGAAACAACGGAGCAGTTTCTTTGTGAAGTTGATGAGGGGTATATTTCGAAGGTTGGAATGACTTTTGAAACACTTGAGGAAGCTAGGTTGTTTTACAAAGAGTACGCTAAACGTGCAGGATTTTCTACAAAAACAAGGAACACAAATAGAAGTAAGTTTGCTAAGGAAGCAATTAATCAACTCATAACATGCAATAGAGAAGGGAAATGGATGTCCGAAGTACCACGTGTTGAGAAGACGAACCCTATATGTGGTGCTAAACGTCCAGCTCGAATTTTCGTTCACGTAGAAAAGAAGACGAGTAGGTGGCGTATTTCAAAAGTTGTTCTTGGCCATTCACATCCTTGCTTTCCTGATTAG 393 0.3893 MKTNDDTEGVLETTEQFLCEVDEGYISKVGMTFETLEEARLFYKEYAKRAGFSTKTRNTNRSKFAKEAINQLITCNREGKWMSEVPRVEKTNPICGAKRPARIFVHVEKKTSRWRISKVVLGHSHPCFPD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc376g00010 130 Pfam FAR1 DNA-binding domain 42 129 IPR004330 -
Stsc376g00010 130 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc376g00010 Stsc-Chr376 47426 47927 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc376g00010 FAR1 6.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc376g00010 - - aip:107636690 132.109