Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc373g00010 ATGGTAAAGTGTAGTAGTAGTAGCTTTACTTTGCTTGCAGTAGTGCTTCTCTTCTTATCAACCCTTTTGGCTTCTTCTTCTTCTTCCTCCAATAATTCTGAGAAACAGGCTTTAATTCAGAGCCGTTGGTGGAGCCATGACCACAATATCTCAAACCATTGCTACTGGACAGGCATCATCTGTGACTATTCTGGAAGTGTTCAAGAGATTGATGGATGGGACTTGAATGTTAATTCCAAATCATTATTGCAGCTACAGAACCTGAATCTCACTGCCTTCCCCAACTTGGTCTATCTCGATCTTCGCGGAATGGGACTTACAGGAAGCATCCCTAAAGAAATTGGTACTCTCAAAAAGCTTAAACGTCTTTACCTATTCGATAACAATCTTCATGGTAAGCTTCCTCCAACTCTTTCAAACCTTACACAGCTTGAGAACCTTGATGTTTCAGGAAACTCTCTTAGTGGCATCATTCCTTCTACTTTTCATCAACTGCAGAATAATTTGGCCTCTATATCTCTTGCTTCAAACCAGATTAATGGTTCTATTCCATCAATTTTCACAAATTTTTCCCATCTAACATACTTAAATCTTTCACATAACAAGTTGTCTGGTGTTATTCCTTCCCAAATTTTTCTACTAACCAACTTGGATTATTTGCTTCTCTCATCAAATCAATTGTCTGGTCTAATTCCACCAAATATTGCAAACACAAGTATTTGGCATATAGATCTCTCTCAGAATCAATTAACAGGATCTACTCTATTTCCTATCCACAATTGCTTTTCTCCTGTAACACTAGATTTAAGTTACAACTCTTTGAATGGAAGCATTGTTTCGCAGACTGGTTGCGTCGTTAAGCTTAACCTTAGTCATAATTTTATCAGTGGTGACATCACATTTAGCTTTGGAGTGAATTCCATGATGGAGAGTTTGGATCTGAGTTATAATAATTTCACAGGTAAACTGCACAAGGAGCTTGCTAATCTTAGATACATAAACCTTTCATACAATTCCCTTGACTTTTATCAAGACACTGATTATTGTTACTTTCAACAAGAGTCATTAATTGGTTGTAACACACCAAGCTTCAAATCCTGTCAAAAAAGTAAGAGCAAGCACCTCCTTGTAATAACTCTTCCTATAGCCTGCACAATTCTTTTTACTATTCTAGTGATAATACTTTTTGCAAGACGCACTAAAGGTAAGAAAATTGAGGAAAGAACAGCAAAAAATGGAGACTTGTTTTCTGTATGGAACTATGATGGGAAAATTGCATTTGAAGATATCATTGAAGCAACACATGACTTTGATATCAGATACTGCATAGGAACTGGTGCATATGGCAGTGTGTATAGAGCACAACTTCCAAGTGGCAAAATTGTTGCATTGAAGAAACTTCACCAAGTGGAGTCTCAAAATCCATCTTTTGACAAGAGCTTCCGAAACGAGGTAAAGATGTTATCACAAATCGTTCATAGAAATATTGTCAAGCTTCATGGTTTTTGTCTCCACAACCGGTGCATGTTTTTGGTAAACGAATACATGGAAAGAGGAAGCTTGTTTTATGCCTTGAGCATTGATGATGAAGCTAAGGAGCTAAGTTGGAGCAAGAGGGTGAATATCATTATCGGAACAGCTAATGCTTTGGCTTACATGCATCATGATTGTTCCCCACCAATAGTTCATAGAGATGTAACAAGCAGCAACATTTTATTGAACTCAGAGTTGCATGCTGTTGTCTCAGACTTTGGCACTGCAAGAATTCTTGATCCGGATTCTTCAAACCGAACCTTGCAAGTTGGAACATATGGATACCTTGCACCAGAATTGGCCTACACAATGAGAGTGACAGAAAAGGGTGATGTATACAGTTTTGGAGTGGTGGCATTGGAAACATTAATGGGAAGGCATCCAAAAGAGCTAATCTTGTCTTTGTTGGACTCTTGTAATAACAAAAACATAATGGTGAAAGATCTGTTGGATTCACGCATCCGTATACCATTATGTCAAAGAGACACTGAAGCAATAGTTCAAGTGGTAAAATTGGCATTGGCATGCTTGCGCTCTAATCCAAAGTTAAGACCATCGATGCAGCAAGTGGTTCACGAGCTTTCAACTTCTAAACAGTCACTGCTTTTACCTTTAGATGAAATTACAGTTCATCAGTTGATAGCTTAA 2181 0.3792 MVKCSSSSFTLLAVVLLFLSTLLASSSSSSNNSEKQALIQSRWWSHDHNISNHCYWTGIICDYSGSVQEIDGWDLNVNSKSLLQLQNLNLTAFPNLVYLDLRGMGLTGSIPKEIGTLKKLKRLYLFDNNLHGKLPPTLSNLTQLENLDVSGNSLSGIIPSTFHQLQNNLASISLASNQINGSIPSIFTNFSHLTYLNLSHNKLSGVIPSQIFLLTNLDYLLLSSNQLSGLIPPNIANTSIWHIDLSQNQLTGSTLFPIHNCFSPVTLDLSYNSLNGSIVSQTGCVVKLNLSHNFISGDITFSFGVNSMMESLDLSYNNFTGKLHKELANLRYINLSYNSLDFYQDTDYCYFQQESLIGCNTPSFKSCQKSKSKHLLVITLPIACTILFTILVIILFARRTKGKKIEERTAKNGDLFSVWNYDGKIAFEDIIEATHDFDIRYCIGTGAYGSVYRAQLPSGKIVALKKLHQVESQNPSFDKSFRNEVKMLSQIVHRNIVKLHGFCLHNRCMFLVNEYMERGSLFYALSIDDEAKELSWSKRVNIIIGTANALAYMHHDCSPPIVHRDVTSSNILLNSELHAVVSDFGTARILDPDSSNRTLQVGTYGYLAPELAYTMRVTEKGDVYSFGVVALETLMGRHPKELILSLLDSCNNKNIMVKDLLDSRIRIPLCQRDTEAIVQVVKLALACLRSNPKLRPSMQQVVHELSTSKQSLLLPLDEITVHQLIA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc373g00010 726 SUPERFAMILY L domain-like 258 345 - -
Stsc373g00010 726 SUPERFAMILY L domain-like 41 279 - -
Stsc373g00010 726 FunFam Leucine-rich repeat receptor protein kinase EMS1 87 165 - -
Stsc373g00010 726 Pfam Protein kinase domain 442 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc373g00010 726 SUPERFAMILY Protein kinase-like (PK-like) 422 705 IPR011009 -
Stsc373g00010 726 PANTHER LEUCINE RICH REPEAT KINASE 2 16 710 - -
Stsc373g00010 726 SMART LRR_typ_2 190 214 IPR003591 -
Stsc373g00010 726 SMART LRR_typ_2 141 164 IPR003591 -
Stsc373g00010 726 SMART LRR_typ_2 327 350 IPR003591 -
Stsc373g00010 726 SMART LRR_typ_2 117 140 IPR003591 -
Stsc373g00010 726 ProSiteProfiles Leucine-rich repeat profile. 192 214 IPR001611 GO:0005515
Stsc373g00010 726 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Stsc373g00010 726 Gene3D Ribonuclease Inhibitor 187 384 IPR032675 -
Stsc373g00010 726 ProSitePatterns Protein kinases ATP-binding region signature. 443 465 IPR017441 GO:0005524
Stsc373g00010 726 PRINTS Leucine-rich repeat signature 327 340 - -
Stsc373g00010 726 PRINTS Leucine-rich repeat signature 193 206 - -
Stsc373g00010 726 Gene3D Transferase(Phosphotransferase) domain 1 516 714 - -
Stsc373g00010 726 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Stsc373g00010 726 FunFam Leucine-rich repeat receptor protein kinase MSP1 400 515 - -
Stsc373g00010 726 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 166 254 - -
Stsc373g00010 726 Gene3D Phosphorylase Kinase; domain 1 398 515 - -
Stsc373g00010 726 FunFam MDIS1-interacting receptor like kinase 2 516 711 - -
Stsc373g00010 726 ProSitePatterns Tyrosine protein kinases specific active-site signature. 561 573 IPR008266 GO:0004672|GO:0006468
Stsc373g00010 726 ProSiteProfiles Protein kinase domain profile. 437 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc373g00010 726 Gene3D Ribonuclease Inhibitor 20 186 IPR032675 -
Stsc373g00010 726 CDD STKc_IRAK 443 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc373g00010 Stsc-Chr373 39555 41839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc373g00010 96 609 Receptor kinase-like Gene Family AT4G08850 39.962 9.53e-114 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc373g00010 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc373g00010 - - gmx:100789677 755.747