Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc373g00007 | ATGGTGGTGGCAAAGTGTAGTAACTTGGCTTTGCTTATTGTAGCAGTGCTGCTTTTGGTTTGCACCACAGCCTCTTCTCTCATATTCCCACCACCAAATGCTTCCTCAGAGAGGCAAGCTTTAATACAGAGTGGTTGGTGGAGTCATGACCACAATATCTCAAACTCAAACCATTGCAATTGGACAGGCATCATCTGTGACCATGCTGGAAGTGTTGCACAGATTAATGGATGGAAATTGAATAGTGAACACAAATTATTGCAGCTACAGGACTTGAACTTCACAGCCTTCCCTAATTTGGTCTCTCTCAATCTTGATGGAATGGGGCTTTCAGGAACCATCCCCGAAGAAATAGGTACTCTCACAAAGCTTGTCAGTCTTGATCTGTCCTTTAACAATCTCCATGGTAAGCTGCCTCCAACACTTTCAAACCTCACTCAGCTTGTAGAGTTTGATGTTTCTTTCAATGCTCTTAGTGGTACCATTCCTTCTAATTTTGGTCATCATTGGGAGACTTTGATGAATCTCTACTTACACTCTAATCAAATTGAAGGTCCTATACCACTAGAATTAGGTAACTTGAGAAGCATAGAGGTACTGTATCTTTCAAATAATTCACTGACAGGTACAATCCCTTCTACTTTGGGTCTATTAGAGAACTTAACACTTCTTGACCTTTCTTCAAACCAAATACAAGGACATATACCAGTAGAGATAGGAAACTTGAAACAATTACAACTATTAAGTCTTTCAAATAACTCTCTTTCTGGTCAAATCCCTCGTGAAATAGGAGCATTGGTGTCTTTACTAGACTTATACATAGATTTCAATCAAATAAATGGTTCAATTCCTTCAGAATTTCAGAATTTGATCAACTTGAAAACTTTGTATCTTTCTCATAATATGATATCTGGTGTTATACCACCCAAACTGTTTCAGTTAACCAACTTGACCTCTCTTAGTATTTCTAACAATCAATTGGGTGGAAACATACCATCAGAGATAGGAAATCTTGCTTCGCTTTGCGACGTAGACCTTTCCTATAACAAGTTAGAAGGATTGATTCCATCTCCAGTGCTAAACTGTTTCAATTTTGGGAAAGTTGACTTGAGTAATAATCTGTTAAGTGGAAATATCCCTTCCTTAATTGGTTATGTTGAAAAACTTGACCTCAGCCACAATTATCTCAATGGTAGTGTACCCTTTTTGTCCACCATTGAAGGCAGAGAACCTGCTTTGTCAAGTTTGGATCTTAGCTACAATAATCTCACAGGTATTCTACCAATAGAACTTGCAAATATAGCTCATATAAATCTGTCATTCAACTCTTTTGAGTGTCCACAAGGCTGCAAAGGTTTCCTTGCAGAATCACTAACTGGTAACACTTTTGTTCAAGTCAAGAAACCCAAAAACAGAAAGAACCTCATTGTAATTACTCTTCCTGTCGCTTGTTGCTTCCTCCTCTTCATTTTTGTTGGCATATTTTGTTATATTCGATGCACCAAGAAGGCTAAATTTGAGCAAGGTTCAGAAAAGAATGGAGACTTGTTTTCCATTTGGAACTATGATGGTAAAGTTGCATTTGAAGACATCATTGAAGCAACACAAGACTTTGATATCAGATACTGCATAGGAACAGGTGGTTATGGCAGTGTGTACAGAGCGCAACTTCCAAATGGAAAAATTGTTGCTTTGAAGAAACTTCACCAAAGAGAGTCACAAAATCCCTCTTTTGACAGGAGCTTCCGCAACGAGGTAAACATGTTATCACAAATCCGTCATAGAAACATTGTCAAGCTTCATGGGTTTTGTCTCCACAATCGATGCATGTTTTTGGTATATGAATACATGGAGAAAGGAAGCTTATTTTATGCCTTGAGCATTGACGATGAAGCTAAGGAGTTAAGTTGGAGCAAGAGGGTGAATATTGTTACCGGAGCAGCTAATGCTTTGGCTTACATGCATCATGATTGTTCCCCACCAATAGTTTACAGAGATGTAACAAGCAGCAACATTTTGTTGAACTCAGAGTTGCATGCTGTTGTCTCAGACTTTGGCACTGCTAGACTTCTTGATCCGGATTCTTCAAATCAGACATTACAAGTTGGAACATATGGATACCTTGCATATGGATACCTTGCACCAGAGCTGGCCTACACAATGAGAGTGACAGAAAAGTGTGATGTATACAGTTTTGGAGTGGTGGCATTGGAAACATTAATGGGAAGGCATCCAAAAGAGCTAATATTGTCTTTGTTTGGCTCATCTAACAAAAACATAATGATAAAAGATCTCTTGGATTCACGGATCCGCTTACCATTATGTCAAAGAGACACTCAAGCTATAGTTCAAGTGGTAAAACTGGCATTGGCATGCTTGCGCTCTAATCCAAAGTCAAGACCATCAATGCAGCAAGTGGCTCATGAACTTTCTAATTTCAAACAATCATCAATTTCTTTGCCTTTTTCTGAAATCAGAGTTCATCAGTTGATAGCTTGA | 2499 | 0.3866 | MVVAKCSNLALLIVAVLLLVCTTASSLIFPPPNASSERQALIQSGWWSHDHNISNSNHCNWTGIICDHAGSVAQINGWKLNSEHKLLQLQDLNFTAFPNLVSLNLDGMGLSGTIPEEIGTLTKLVSLDLSFNNLHGKLPPTLSNLTQLVEFDVSFNALSGTIPSNFGHHWETLMNLYLHSNQIEGPIPLELGNLRSIEVLYLSNNSLTGTIPSTLGLLENLTLLDLSSNQIQGHIPVEIGNLKQLQLLSLSNNSLSGQIPREIGALVSLLDLYIDFNQINGSIPSEFQNLINLKTLYLSHNMISGVIPPKLFQLTNLTSLSISNNQLGGNIPSEIGNLASLCDVDLSYNKLEGLIPSPVLNCFNFGKVDLSNNLLSGNIPSLIGYVEKLDLSHNYLNGSVPFLSTIEGREPALSSLDLSYNNLTGILPIELANIAHINLSFNSFECPQGCKGFLAESLTGNTFVQVKKPKNRKNLIVITLPVACCFLLFIFVGIFCYIRCTKKAKFEQGSEKNGDLFSIWNYDGKVAFEDIIEATQDFDIRYCIGTGGYGSVYRAQLPNGKIVALKKLHQRESQNPSFDRSFRNEVNMLSQIRHRNIVKLHGFCLHNRCMFLVYEYMEKGSLFYALSIDDEAKELSWSKRVNIVTGAANALAYMHHDCSPPIVYRDVTSSNILLNSELHAVVSDFGTARLLDPDSSNQTLQVGTYGYLAYGYLAPELAYTMRVTEKCDVYSFGVVALETLMGRHPKELILSLFGSSNKNIMIKDLLDSRIRLPLCQRDTQAIVQVVKLALACLRSNPKSRPSMQQVAHELSNFKQSSISLPFSEIRVHQLIA | 832 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc373g00007 | 832 | ProSiteProfiles | Leucine-rich repeat profile. | 292 | 314 | IPR001611 | GO:0005515 | |
Stsc373g00007 | 832 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 214 | 308 | - | - | |
Stsc373g00007 | 832 | SUPERFAMILY | L domain-like | 55 | 382 | - | - | |
Stsc373g00007 | 832 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 662 | 674 | IPR008266 | GO:0004672|GO:0006468 | |
Stsc373g00007 | 832 | Gene3D | Transferase(Phosphotransferase) domain 1 | 617 | 822 | - | - | |
Stsc373g00007 | 832 | ProSiteProfiles | Protein kinase domain profile. | 538 | 811 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc373g00007 | 832 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 501 | 616 | - | - | |
Stsc373g00007 | 832 | SUPERFAMILY | L domain-like | 355 | 448 | - | - | |
Stsc373g00007 | 832 | Pfam | Protein kinase domain | 543 | 808 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 242 | 266 | IPR003591 | - | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 315 | 338 | IPR003591 | - | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 411 | 433 | IPR003591 | - | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 121 | 144 | IPR003591 | - | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 194 | 217 | IPR003591 | - | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 218 | 241 | IPR003591 | - | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 290 | 314 | IPR003591 | - | |
Stsc373g00007 | 832 | SMART | LRR_typ_2 | 145 | 169 | IPR003591 | - | |
Stsc373g00007 | 832 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 309 | 389 | - | - | |
Stsc373g00007 | 832 | FunFam | MDIS1-interacting receptor like kinase 2 | 617 | 816 | - | - | |
Stsc373g00007 | 832 | SMART | LRR_sd22_2 | 290 | 308 | - | - | |
Stsc373g00007 | 832 | SMART | LRR_sd22_2 | 121 | 147 | - | - | |
Stsc373g00007 | 832 | SMART | LRR_sd22_2 | 218 | 244 | - | - | |
Stsc373g00007 | 832 | SMART | LRR_sd22_2 | 314 | 340 | - | - | |
Stsc373g00007 | 832 | Gene3D | Ribonuclease Inhibitor | 172 | 282 | IPR032675 | - | |
Stsc373g00007 | 832 | Gene3D | Ribonuclease Inhibitor | 283 | 383 | IPR032675 | - | |
Stsc373g00007 | 832 | Gene3D | Ribonuclease Inhibitor | 34 | 171 | IPR032675 | - | |
Stsc373g00007 | 832 | Gene3D | Phosphorylase Kinase; domain 1 | 499 | 616 | - | - | |
Stsc373g00007 | 832 | FunFam | Nuclear pore complex protein NUP107 | 35 | 189 | - | - | |
Stsc373g00007 | 832 | SUPERFAMILY | Protein kinase-like (PK-like) | 523 | 810 | IPR011009 | - | |
Stsc373g00007 | 832 | CDD | STKc_IRAK | 544 | 810 | - | - | |
Stsc373g00007 | 832 | Gene3D | Ribonuclease Inhibitor | 385 | 450 | IPR032675 | - | |
Stsc373g00007 | 832 | Pfam | Leucine rich repeat | 172 | 231 | IPR001611 | GO:0005515 | |
Stsc373g00007 | 832 | Pfam | Leucine rich repeat | 271 | 327 | IPR001611 | GO:0005515 | |
Stsc373g00007 | 832 | Pfam | Leucine Rich Repeat | 123 | 145 | IPR001611 | GO:0005515 | |
Stsc373g00007 | 832 | ProSiteProfiles | Leucine-rich repeat profile. | 412 | 433 | IPR001611 | GO:0005515 | |
Stsc373g00007 | 832 | ProSitePatterns | Protein kinases ATP-binding region signature. | 544 | 566 | IPR017441 | GO:0005524 | |
Stsc373g00007 | 832 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 218 | 811 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc373g00007 | Stsc-Chr373 | 28466 | 31057 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc373g00007 | 100 | 713 | Receptor kinase-like Gene Family | AT4G08850 | 40.351 | 9.94e-134 | 422 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Stsc373g00007 | Pkinase | 2.8e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc373g00007 | - | - | gmx:100789677 | 831.632 |