Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc36g00010 ATGACCTTTGCTGGTGTATGGTTGGATGAAACACGAATGCTGTGCTTGGACGCGGGGCGGGCGTTGCAGCTGGGTGTAGCGCAGTCAAATGCAATCAACATTCAAAAATGGAGTGTGGGGGCACTGGAGGGGAGACAGGGAGAAGACACGATGAATGTGTTGGTTATTGTTGTTCTCATCTTTGTTGGTTACGTAGGGCTAGCTTCTCGTCAGCTCTTGGATTTGTTTTCTCTGAGAACTAATGCAGCAACTGCGGCGGCTGCAGCAGCTGAGAAGCTAAAGTTGCAGTTGCTCTCGGTGAATGCCGTCCTTGGAGATGCAGAAGACAAACAGATTGTCAACCCATATGTCAAGATATGGGTTGATGAGCTCAGAGACACTGTATATCATGGCCAAGACCTTTTGGACCAGATTGCTACTCAAGTGTTGCGTTTAAATCTTGCATCCAAGTCAAACACTGCCATGGAATGGGTAAGAGAATTCTTGGACTCCATTACCAATAAATTGAATTCTAGTCTTGATGAGATAAACACTAGAATACAAGTTTTAAGGGATCAAAAGGATTGTCTAGGCCTCAGAGAACGTCCAGAAAAGCAATCTCGGTTGGAGGCAGGAAGTGCTGACCTAATGTATGTGCCTACAACTCGTATGGTGGATCAGTCTAAGGTCTATGGCAGGGATCATGACAAAGACGAAATAATTCGACTCTTGTTGAATGCCATGAGTGAGCAAGTGGATCCAGTATGCGTTGTTGCAATTGTTGGGATGGCAGGGGTTGGCAAGACCACTCTGTCTCAACTTTTGTTTAACGACCATCGGTTAGTGCCAATGTTCGACACTTTATCGTGGATTCAGGTTTCGGCCGTATCGGATGTGCTTCACTTAACCAAGAAGGTTTGCGAGTCCATGAGGGACAACTTGGACACACTTCAGGTTGAACTTAATAACAAGCTGAGAACACAAAGGATGTTGCTGGTTTTAGATGATTTTTGGTCTGTGAGCTTTTTTGATTGGGACCTCTTCAAGATGGCCTTTGCCGATGCTATTCATCATAGTGTCATTATAGTCACCACGCGCAATGAAGATGTTGCAACCACTATACGCGCTGATGTTACTTATTTCCTTTCCGCGCTACCATATGAGGATTGTTGGGATGTCTTTGCCCACTGTGCTTTTGGAAATAGAAACCTGACTACAGCAGATCCAGCTTTGGTGGAGATTGGTGAGAAAATAGTGAGGAAGTGCAAAGGTCTTCCCCTAGCTGCAAAAGTGCTTGGGAGTCTCTTACACTTGGTGACGGATGCTAGAGAATGGAATGTCATACTGCAAAGCAAGATTTGGGATTTGGATGCTAAGAAGAGCAACATATTGCCGGCTTTAAGATTGAGCTATCAACTCCTTCCGTCGCATTTGAAGGCCTGTTTTGCTTACTGCTCTGTGTTTCCTAAGGGATATGAAATTGAAAGGGTGAACCTAATCCATTTTTGGATGGCTGAGGGTCTTCTGCAACCATCAAAGACTAAAACAATGCACGAGGTAGGGGAGCAATACTTGCAGGAGTTAATGTCAAGGTCATTACTGCAACGATCAACTAGTAATGACTCGTGTGTCATCATGCATGATTTGATAAGCGACTTGGCACAATACGTGGGAGGCGAGTTTTTCCACTTCTTTGAGGAGGGTGGTGATTCGAAAATTCCTGAGAAGGTTCGCCATTTATCATTTTCAAAAGACAAGCCTGATGTGCCAAAGAGCTATCTTTCACAATTGAGGACCTTTCTAGCATTCAAAGACTCAAATTCTAGGCAAGTTGATTCATTAAGTGAGAATGATTTTAATAGTGTGATACCACTTTTTGAAGGCATTCGCGTGCTCTCTTTGTGTAGTTATCCCATTTCTACATTACCCTCTACAATAGGAAACTTGAAGCATTTGCGGTATCTGAATCTTTCTTATACAATGATTCAAGAGTTACCAAGCTCTATAGGGTCTTTGTACAATTTACAGATATTCCTGCTAGCACATTGTACTCGCCTCACTAGTTTGCCCAAAGATCTGGAGAATTTGACTGATTTGTGCTATCTTGATGTGACTGGTGCTCCTTTAGCAGAGATGCCACCAAATTTTGGTAGATTAAAGCTTCTTCGACATCTTACTACCTTCATCGTGGGCAAAAACACTGGATCAAACATTAGTGAGTTAGGAGCTCTTTCTCAACTGCATGGTTCACTTTCAATTGTGAGTCTACAGAATGTTATTGATGGCACAGAAGCCTCAGGGGCCAACTTGATGATGAAGACATTTATTGATGAGTTGGAATTCAAATGGACAAACAATGTCCATAATTTATCCATGGAAGCAATTGTTCTTCATAACCTACAGCCTCATAAGAACTTGAAGAAGCTCCAGATTGAAAACTATGGTGGCAGAACATTTCCAGAATGGTTAGGTAACCCTTTATTCTCTAACTTGGTGTCTGTACAACTAATTGGTTGCATTAGCTGCTTGACATTGCCACCACTTGGGCAATTAAACTCTCTTAAGACCCTCTTCATAGCAAAAATGACATGGGTGGAAAGAGTGGGCCTTGAGTTCTATGGTAACACAAATTCACCCTTTAGAGCCCTTGAAATTTTGACTTTCAAGGACATGCATAGGTGGAAGGAGTGGTTGCCATTGGACATTGAAGATTTCTTTCCTTCTCTTGAAGAGCTTCACATTCAAAATTGTCCTAAACTTACAGGAAGTTTGCCCCAACATTTGCGTTCTCTTAACAAACTAGCAATTTTTAAATGTAGCATTGATTCCCTTCCAAGGGTTCCGATGTTGAGAGAACTGGAGCTAATTGATTGTGATGCATTGGTGTCCCTGCCTACGGAAATGATGCAAGGGAATACACATATATTCAAAGTGTCCATATACAATTGTTCGTCACTTGAGTATGTTCCTGCACTTGGTCTTCCCATAAGGTTAGAGTTACTTTACATATGCAAATGTAGGAATATAGAGCTTTATCCACAAGAACAAGTGATTGAGCATTTGCACTTGGAAGACAGTTGTGACAGTCTCATAACCTTTTCATTATCTTCCTTTAGAGGAATTCGTCACCTTCATATCCAGGGTTGTCCCAATCTTGAATCTCTAAGTATATCAAATGAGTTTACAGAGGAATTGTACCATCTTGAAACGATACAACTGAAGGATTGCCCCAACCTAGAGTTCTTCCCGTATAGAGGGTTACCTGCTCCTAAACTTCAAGTGCTTTCTATTAGCAACTGCAGAATGTTATTACCCCAGAAAGAGTGGGGTTTGAACAAAATGGTGTTGCTTTCATATTTTGGGATTGAAGGAGAGTTAACTGGTTTAGAGTCATTTCCAGATGAAGGATTACTTCCAGCTTTCTTGACTGATCTTCATATCATAGGACTTGAAGACCTCACATCACTGAATCATGATGGTCTTCAACACCTTGTTGCTCTTAAAAATTTGGTGATTGAAGGTTGTAGCATGCTCGAGTTTCTACCTCCACAGGGTCTTCCGGGTTCCTTGTCAAATCTTATCATTGCAAATTGTCCCTTGCTTGTTCCTCTATGCCAATTCGAGACGGGAGCTTATTGGCCCCTCATTGCTCACATTCCCAACAAAGACATTGTGTGA 3657 0.4214 MTFAGVWLDETRMLCLDAGRALQLGVAQSNAINIQKWSVGALEGRQGEDTMNVLVIVVLIFVGYVGLASRQLLDLFSLRTNAATAAAAAAEKLKLQLLSVNAVLGDAEDKQIVNPYVKIWVDELRDTVYHGQDLLDQIATQVLRLNLASKSNTAMEWVREFLDSITNKLNSSLDEINTRIQVLRDQKDCLGLRERPEKQSRLEAGSADLMYVPTTRMVDQSKVYGRDHDKDEIIRLLLNAMSEQVDPVCVVAIVGMAGVGKTTLSQLLFNDHRLVPMFDTLSWIQVSAVSDVLHLTKKVCESMRDNLDTLQVELNNKLRTQRMLLVLDDFWSVSFFDWDLFKMAFADAIHHSVIIVTTRNEDVATTIRADVTYFLSALPYEDCWDVFAHCAFGNRNLTTADPALVEIGEKIVRKCKGLPLAAKVLGSLLHLVTDAREWNVILQSKIWDLDAKKSNILPALRLSYQLLPSHLKACFAYCSVFPKGYEIERVNLIHFWMAEGLLQPSKTKTMHEVGEQYLQELMSRSLLQRSTSNDSCVIMHDLISDLAQYVGGEFFHFFEEGGDSKIPEKVRHLSFSKDKPDVPKSYLSQLRTFLAFKDSNSRQVDSLSENDFNSVIPLFEGIRVLSLCSYPISTLPSTIGNLKHLRYLNLSYTMIQELPSSIGSLYNLQIFLLAHCTRLTSLPKDLENLTDLCYLDVTGAPLAEMPPNFGRLKLLRHLTTFIVGKNTGSNISELGALSQLHGSLSIVSLQNVIDGTEASGANLMMKTFIDELEFKWTNNVHNLSMEAIVLHNLQPHKNLKKLQIENYGGRTFPEWLGNPLFSNLVSVQLIGCISCLTLPPLGQLNSLKTLFIAKMTWVERVGLEFYGNTNSPFRALEILTFKDMHRWKEWLPLDIEDFFPSLEELHIQNCPKLTGSLPQHLRSLNKLAIFKCSIDSLPRVPMLRELELIDCDALVSLPTEMMQGNTHIFKVSIYNCSSLEYVPALGLPIRLELLYICKCRNIELYPQEQVIEHLHLEDSCDSLITFSLSSFRGIRHLHIQGCPNLESLSISNEFTEELYHLETIQLKDCPNLEFFPYRGLPAPKLQVLSISNCRMLLPQKEWGLNKMVLLSYFGIEGELTGLESFPDEGLLPAFLTDLHIIGLEDLTSLNHDGLQHLVALKNLVIEGCSMLEFLPPQGLPGSLSNLIIANCPLLVPLCQFETGAYWPLIAHIPNKDIV 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc36g00010 1218 Coils Coil 166 186 - -
Stsc36g00010 1218 Gene3D Ribonuclease Inhibitor 935 1202 IPR032675 -
Stsc36g00010 1218 FunFam Probable disease resistance protein At1g63360 464 549 - -
Stsc36g00010 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 478 IPR027417 -
Stsc36g00010 1218 Gene3D Ribonuclease Inhibitor 576 754 IPR032675 -
Stsc36g00010 1218 Gene3D Ribonuclease Inhibitor 762 933 IPR032675 -
Stsc36g00010 1218 SUPERFAMILY L domain-like 529 1011 - -
Stsc36g00010 1218 Pfam NB-ARC domain 236 444 IPR002182 GO:0043531
Stsc36g00010 1218 PRINTS Disease resistance protein signature 415 429 - -
Stsc36g00010 1218 PRINTS Disease resistance protein signature 1056 1072 - -
Stsc36g00010 1218 PRINTS Disease resistance protein signature 317 331 - -
Stsc36g00010 1218 PRINTS Disease resistance protein signature 250 265 - -
Stsc36g00010 1218 PANTHER DISEASE RESISTANCE PROTEIN RP 91 910 IPR044974 GO:0006952
Stsc36g00010 1218 Coils Coil 300 320 - -
Stsc36g00010 1218 Pfam Rx N-terminal domain 67 147 IPR041118 -
Stsc36g00010 1218 Gene3D - 209 374 IPR027417 -
Stsc36g00010 1218 Gene3D - 65 182 - -
Stsc36g00010 1218 Gene3D - 378 462 IPR042197 -
Stsc36g00010 1218 Gene3D - 463 549 IPR036388 -
Stsc36g00010 1218 SUPERFAMILY L domain-like 922 1211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc36g00010 Stsc-Chr36 95027 100284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc36g00010 251 716 WRKY Transcription Factor Family AT5G45050 24.165 5.61e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc36g00010 - - ahf:112732721 1461.82