Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc36g00001 ATGCTAGTGAACAACATAGATAAGCAAAAGGAAGAAATTCAGAAAATTTCTCAAAAGATCCGAGACCATGAAAACAATTGTAAAGAAATCTCCAACAAAATCCGCGATTTTCAACGGAGGCAATGCAATAAGATTTCAGCTTTTGGAGGAGACAGAGTAATGGATCTGATGCGTTTAATTGAGAGAGATCATCGAAAGTTTAAGATGCCACCGATTGGTCCAATTGGTGTCCATTTGAATTTACTTGATGCTGAACAATGGGCTGATACAGTTGAACATGCCATTGGGGCAATGCTCAATTCCTTTATAGTAAATGATCATAAGGATTTTCTTCTTCTGAAACAATTGGCGAAGGAAGCAAAGTATAACAGACTTCGAATTATTATTTATAGTTTTTCAATAGCGAGGTTAAAAATACCACAGCACATGCTTCCTGAGACAAAACATCCATCAATACTTTCCCTTTTACAATCTGAGAACCACACTGTGATGAATGTCTTAGTGGATATAGGAAATGTTGAGAGACAAGTACTCGTAAAGGATTACGAGACTGGCAAAGTGGTTGCTTTTGAACAGAAGCCTCGGAATCTGAAAGAGATCTACACAGCTGATGGAAGGAAAATGTTTTCACGAGGTAATGTGGAGACTACCATTCCCCTACAGCGGAATGGTCCTGGTCGTCTGTGCAGTTCGTTTGAAGATTATATTAAGGATCTCGAAAGTGAGGCATCTAATGAACAAAATGCAGTTAATGAAGGTAAAAGAAGTAAGCGACAGGCAGAGATCAAACTTTGGGAACTAGAATCAGATCCGACACGTGTAAAGAGGCGTCGTGATTGTGAAAATGCTGGAAGAACTTTATATTCTAAGAAGCTCGCTTTGGAGGAGGCAATGAATCAGCGTGCTGGTGAAAATAGCTCAATTCCTTCGTCATCTGTTGAGGAGCTTCGTGTAGAAATTACAGAACTCAAGAAGAATCTAGAAGAAGAAAAAATATTGTTGAAAGCCCTTCGACAAAGGAAGGATGAAGCATCGGGGAAGGCAAAGGATCTTAAAGTAAAATTTGACAAGCTGCGTGAGTCAGCAGAGGAGAAATTTGCTGCCATGGAAGAAGCTGGGATTCAGTGCAGTGAGATTGAAAATGAATTGAAGTCAGCTGAAAAGGGAAAGGCTCACTATGAAAGTCTCATGGCAAACAGTGTCCTACCTGCTATTAAGACGGCTGAGGAAGAATATCAGGATCTTACAAAAATGCGTGAGGAAAATGCTGAAAAGGCTTCCAAAATTTGCCCTGAGAATGAAGTCAACGGTTGTGGTTCGTTAGAAGGTTCTGATATGAAAACCCCAGAACAAATCAGTGCTGAATTAGGAGAACTAACTCAGAAAGTTGAGCGTGAGTGCCAAAGGCACTCTGAACCAATTGCTGATCTTAGGATGCTTTATGAGAAAAAAGAACGTAAGATTAAGAAGAAGCAGCAAGTGTACAAAGCTCTTCGACAAAAGATGGATGCATGCCAGAAAGCCTTAGGGATACGAGGGATCAAGTTTAAGAAGAATGCAAATTATCTGAAGCAACAGCTTTCTTGGAAATTTAATGATCATTTGAGGAAGAAAGGGATCAGCGGACTTATTAAAGTTAATTATGAGGAGAAAACCTTATCTATTGAGGTCCAAATGCCTCAAGATGCATCAAACAGAGCTGTTCGAGACACCAGGGGGCTTTCAGGTGGGGAGCGTTCGTTTTCAACATTATGTTTTGCATTAGCCCTTCACGAAATGACAGAATCCCCTTTCAGAGCAATGGATGAATTCGATGTCTTTATGGATGCAGTAAGCCGAAAAATCAGCTTGGACACCCTGGTTGATTTTGCTGTGTCACAAGGATCCCAGTGGCTATTCATCACTCCCAATGATACCAGCATGGTGAATCCCGGACCTAAGGTAAGAAAGCTGCAAATGCCACCTCCTCGTTCTTGA 1977 0.4072 MLVNNIDKQKEEIQKISQKIRDHENNCKEISNKIRDFQRRQCNKISAFGGDRVMDLMRLIERDHRKFKMPPIGPIGVHLNLLDAEQWADTVEHAIGAMLNSFIVNDHKDFLLLKQLAKEAKYNRLRIIIYSFSIARLKIPQHMLPETKHPSILSLLQSENHTVMNVLVDIGNVERQVLVKDYETGKVVAFEQKPRNLKEIYTADGRKMFSRGNVETTIPLQRNGPGRLCSSFEDYIKDLESEASNEQNAVNEGKRSKRQAEIKLWELESDPTRVKRRRDCENAGRTLYSKKLALEEAMNQRAGENSSIPSSSVEELRVEITELKKNLEEEKILLKALRQRKDEASGKAKDLKVKFDKLRESAEEKFAAMEEAGIQCSEIENELKSAEKGKAHYESLMANSVLPAIKTAEEEYQDLTKMREENAEKASKICPENEVNGCGSLEGSDMKTPEQISAELGELTQKVERECQRHSEPIADLRMLYEKKERKIKKKQQVYKALRQKMDACQKALGIRGIKFKKNANYLKQQLSWKFNDHLRKKGISGLIKVNYEEKTLSIEVQMPQDASNRAVRDTRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVSQGSQWLFITPNDTSMVNPGPKVRKLQMPPPRS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc36g00001 658 Coils Coil 474 508 - -
Stsc36g00001 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 638 IPR027417 -
Stsc36g00001 658 Coils Coil 405 425 - -
Stsc36g00001 658 Coils Coil 6 40 - -
Stsc36g00001 658 Coils Coil 310 361 - -
Stsc36g00001 658 Coils Coil 236 256 - -
Stsc36g00001 658 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 4 657 - -
Stsc36g00001 658 Coils Coil 369 396 - -
Stsc36g00001 658 Gene3D - 405 645 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc36g00001 Stsc-Chr36 213 11975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc36g00001 10 658 Structural Maintenance of Chromosomes family AT5G61460 53.621 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc36g00001 K22804 - gmx:100816916 783.867