Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc369g00013 ATGAAGAAGGTTTCCAAGACCAGCTGCAAGTCTGCATCACACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTTGATGACCTGCAGCTGATGTTTTTAGATCTGCAGTTTGCTAGGAAGGAGAGCCGTACAGTTGATGCTGCTGTCCTTGAGGAGCAAGTCCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTTAACGAGCCCTCGCCTGCTTCTTCTTTGCAGCAAGGTGGCAGTCTTGGGTCATTCTCCACAGATATCTGTCGGTTGTTGCAGCTCTGTGAGGAGGAAGATGATGCATCTAGTCCATTAGCTGCCCCTAAGCCTGAACCTAATGATCAGATTCAGCAGATTGGGGGTAAGGTTGTATTCCAAGAGGGTCAACGGCAACATGATTTCCCATTGGTTGAGGAGCGCAAACACTCCATCTCAGGAGTTCAAAATGTGGCAGCTAACACCTTGGAAGGACCTGCTTTAGAATATCACCAGTTTGATTTGCATCAGGACTTTGATCACGGCTTCTATACTGGTTTTAATGGCATAGGTTACTCTGAGGAGGATGCTATTCCACATATATCTAGCTACCTGCCAAGTATCTGCCCTCCACCTTCTGCTTTCTTGGGCCCAAAATGTGCCCTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTAGCCTTGAATGAAGGGCCTCCAGGCATGTCCCCAGTTCTACGACCTGGGGGGATTGGTTTGAAAGATAATTTACTTTTTGCCGCTCTTAGTGCCAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGCGAGGGAGCAGCAACTGCAAAGTCTCCATGGAACGCACCTGAGCTCTTTGATCTTTCTGTTCTCGAGGGTGAGACTATCAGGGAGTGGCTCTTCTTCGACAAACCTCGAAGGGCATTTGAGAGCGGAAACAGAAAGCAGAGATCATTGCCAGATTATAGCGGACGCGGTTGGCATGAATCTCGAAAGCAAGTGATGAATGAATATGGAGGTCTGAAGAGATCCTATTATATGGACCCACAACCACTGAACCATTTTGAGTGGCACCTCTATGAATATGAGATTAGCAAGTGTGATGCATGTGCCTTATATCGGTTGGAACTAAAGCTTGTTGATGGGAAAAAGAACTCTAAAGCAAAAGTTAACAATGATTCAGTTGCTGATTTACAGAAGCAGATGGGGAGGCTTTCTGCTGAGTTCATGTCTGATAACAAAAGGCCTGCAAAAGGCAGAGCCAAACTCAATGCCAAGGTTGGCTTAGGTGGTGTCTATTCTGCTTCAGGAAGAGTGGCTCCACTAAGCGGAACATATGATTATGGTTTAGCTGCACCATATGACTATCTTGTTGATAACATGGGTGACTACTATGGAACATGA 1434 0.4686 MKKVSKTSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQIQQIGGKVVFQEGQRQHDFPLVEERKHSISGVQNVAANTLEGPALEYHQFDLHQDFDHGFYTGFNGIGYSEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMSPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKVNNDSVADLQKQMGRLSAEFMSDNKRPAKGRAKLNAKVGLGGVYSASGRVAPLSGTYDYGLAAPYDYLVDNMGDYYGT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc369g00013 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 472 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc369g00013 Stsc-Chr369 43464 47185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc369g00013 3 475 VOZ-9 Transcription Factor Family AT1G28520 70.672 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Stsc369g00013 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc369g00013 - - gmx:100798565 898.656