Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc367g00002 ATGAAACAATTTCAGTCACTTCCTGATGGCAATAACTTGGTTTCTGAAGACGAAAGCTTTGAGATGGGTTTCTTCAGTCCCGGTAATAACTCAAACCGCTACCTCGGAATCTGGTATAAAGGAATCCCAGTTAGAACTGTTGTTTGGGTTGCTAACCGTGAAAATCCGGTCAGAGACAACTCCAGCAAATTCAGCATCAACTCAGAAGCAAGATTAGTGATCCTCAGCCATAACGAAACTCTTGTTTGGGCAGCAAACTCAACTACAAAGAGGCAAGTGGTGAGTCCAATTGTGCAACTTCTAAACTCAGGAAACTTAGTCCTAAGAGAAGAAAAAGACAGCAATTCAGAAAACTACTTATGGCAGAGCTTTGACTATCCATGTGATACATTTTTGCCGGGAATGAAGATTGGTTGGAACCTGAAAACTGGCCTTAACAGGCAGTTATCAGCATGGAAGAATTGGGATGACCCTTCTAAAGGAGATTTAACCTGGGGCGTTGTTCTTGGGACCACCCCTGAGTTGGTTATGTGGAAAGGCACAACAGAGTACTATAGGAGTGGTCCATGGAATGGTGAAAGATTCAGTGGCAAAACTACATCCCTTTTTCAATTAGAATTCGTGTCCACCAATGATGAGTTGTTTTACACATACAACCTCAACAAGGACTCATCACTGATCACAAGAGTTGTTCTAAATGAATCGGCTTATTCGCGTCAGCGCTACAATTGGATCCCGGAGAACCAGACTTGGCGATTGTATTCGTCGGTGCCTCGCGATTATTGTGACAACTATAATCTCTGTGGTGCTTATGGGAACTGCCTTGTGAATGAGTCACCCCCCTGCGAGTGTCTAACAGGCTTCAAGCCCAAGTTATCGCGACAGTGGGAGGCATTGGATTGGACTGAAGGATGTATTCAAAGTGAAGAGTGGAAATGCAGGGAGAAAAATAGAGACGGATTTCAGAGATTTAGTGGGTTGAAAATGCCGGATACTACTAAGTCTTGGGCAAGTGGGAATTTGACGCTTGATGATTGCAGGGTCAAGTGCTGGCAGAATTGTTCTTGTGCTGCCTATGCAAACTTAGACATTAGAGGAGAAGGGAGTGGCTGCCAAATTTGGTTTGGAGATTTAATGGATCTCAGGGTTGCTTCGGTTCCAGGGCAAGATTTGTACGTTCGGATGCATACATCATCAACTGGTTCCTCTAACAAAACAAATTCAAGCGAAGAAAGTTCAAAGCGTGGACAAAGGAAAAAGCTTGTTGTGGCAATTCCAGTTAGCTTTCTCTTGGTTCTTATGATTGTTTTAACTTTCATTTACCTTTATTGGAGGAAAAGAAAGCTTAGAGAAAAAATAGAAAATATATCACAAGAAAGGGGAGATGAAGCCCGTGAAAACAAATTCGAGCTTCCATTCTTTGAATTTGACACAATAGTTCGTGCCACTAATAACTTCTCAAGTGATAAGAGGCTTGGCCAAGGTGGTTTCGGGCCCGTCTACATGGCAAATTCTTCTCAAAGAGAAATTCTTGATTGGCCTAGACGATTCAACATCATATTTGGAATTGCTCGTGGACTTCTTTATCTTCACCAAGACTCAAGATTGAGAATTATACATAGAGATCTTAAAACAAGTAATATTTTATTAGATAACGAATTGAACCCAAAAATTTCAGACTTTGGAATCGCACGGATGTTTGCTGAAAATCAAATAGAAGCAAATACGAAAATGATAGCAGGGACATATGGCTATATGGCACCAGAATATGCAATTGACGGGAGATTCTCCATCAAATCTGATATTTTTAGCTTTGGAATCATATTGTTGGAAGTAGTAAGTGGAAGGAAAAACACAGGAGTTTTCTATCCGAACCAAGGATTTAATCTTCTAGGACATGCATGGAGATTATGGAAAGAAGGAACTCCAATGAAATTAGTAGATGCTTGTTTGGGAGATGCCTTTACAGTTTCGGAAGTTCTACGTTGTATACATATTGGTCTTTTATGTGTGCAATTGCATCCAGAGGATAGGCCAAACATGTCATCAGTGATTTTGATGCTGAACAGTGAGAATAATACTTTGCCTCAACCAAAGGAACCCGGTTTCCTTATAGAAAGGATGTCAATAAATGAAGCAGGGAAAACCTCATCCGATGAAAATAAGATTAATTCATCAACTAATGAAATCACTGATACATTGTTAGAGGCCAGATAG 2217 0.4069 MKQFQSLPDGNNLVSEDESFEMGFFSPGNNSNRYLGIWYKGIPVRTVVWVANRENPVRDNSSKFSINSEARLVILSHNETLVWAANSTTKRQVVSPIVQLLNSGNLVLREEKDSNSENYLWQSFDYPCDTFLPGMKIGWNLKTGLNRQLSAWKNWDDPSKGDLTWGVVLGTTPELVMWKGTTEYYRSGPWNGERFSGKTTSLFQLEFVSTNDELFYTYNLNKDSSLITRVVLNESAYSRQRYNWIPENQTWRLYSSVPRDYCDNYNLCGAYGNCLVNESPPCECLTGFKPKLSRQWEALDWTEGCIQSEEWKCREKNRDGFQRFSGLKMPDTTKSWASGNLTLDDCRVKCWQNCSCAAYANLDIRGEGSGCQIWFGDLMDLRVASVPGQDLYVRMHTSSTGSSNKTNSSEESSKRGQRKKLVVAIPVSFLLVLMIVLTFIYLYWRKRKLREKIENISQERGDEARENKFELPFFEFDTIVRATNNFSSDKRLGQGGFGPVYMANSSQREILDWPRRFNIIFGIARGLLYLHQDSRLRIIHRDLKTSNILLDNELNPKISDFGIARMFAENQIEANTKMIAGTYGYMAPEYAIDGRFSIKSDIFSFGIILLEVVSGRKNTGVFYPNQGFNLLGHAWRLWKEGTPMKLVDACLGDAFTVSEVLRCIHIGLLCVQLHPEDRPNMSSVILMLNSENNTLPQPKEPGFLIERMSINEAGKTSSDENKINSSTNEITDTLLEAR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc367g00002 738 ProSiteProfiles Protein kinase domain profile. 359 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc367g00002 738 Pfam D-mannose binding lectin 46 153 IPR001480 -
Stsc367g00002 738 SMART serkin_6 486 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc367g00002 738 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 124 - -
Stsc367g00002 738 ProSiteProfiles PAN/Apple domain profile. 313 396 IPR003609 -
Stsc367g00002 738 SMART ntp_6 316 395 IPR003609 -
Stsc367g00002 738 Pfam S-locus glycoprotein domain 185 291 IPR000858 GO:0048544
Stsc367g00002 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Stsc367g00002 738 SUPERFAMILY alpha-D-mannose-specific plant lectins 47 158 IPR036426 -
Stsc367g00002 738 SMART blect_4 4 127 IPR001480 -
Stsc367g00002 738 ProSiteProfiles Bulb-type lectin domain profile. 1 121 IPR001480 -
Stsc367g00002 738 Gene3D - 1 124 IPR036426 -
Stsc367g00002 738 PIRSF SRK 1 504 IPR024171 GO:0004674
Stsc367g00002 738 PIRSF SRK 502 738 IPR024171 GO:0004674
Stsc367g00002 738 Gene3D Transferase(Phosphotransferase) domain 1 500 700 - -
Stsc367g00002 738 Pfam Domain of unknown function (DUF3403) 690 738 IPR021820 GO:0004674
Stsc367g00002 738 CDD B_lectin 5 127 IPR001480 -
Stsc367g00002 738 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 499 696 - -
Stsc367g00002 738 Pfam Protein tyrosine and serine/threonine kinase 507 685 IPR001245 GO:0004672|GO:0006468
Stsc367g00002 738 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 679 - -
Stsc367g00002 738 Coils Coil 446 466 - -
Stsc367g00002 738 Pfam PAN-like domain 313 381 IPR003609 -
Stsc367g00002 738 CDD PAN_AP_plant 314 394 - -
Stsc367g00002 738 SUPERFAMILY Protein kinase-like (PK-like) 470 710 IPR011009 -
Stsc367g00002 738 MobiDBLite consensus disorder prediction 715 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc367g00002 Stsc-Chr367 14846 20278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc367g00002 412 705 Receptor kinase-like Gene Family AT4G23280 46.178 1.52e-83 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc367g00002 Pkinase 2.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc367g00002 - - ahf:112775289 761.525