Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc36607g00001 ATGGCGAAGAACATTGGATTCGAGAACACAGCAGGCCCAGGAAAGCACCAAGCAGTGGCACTCAGAATCACAGCAGACCAAGCCGTGATCTACAACTGCCACATGGAAGGTTTCCAAGACACACTCTACGTCCAATCCCAACGCCAATTCTTCCGTGACTGCACCATCACAGGCACCGTTGACTTCATCTTTGGGGACGCAGTTGGAGTCTTCCAAAACTGCAAGCTCCTTGTCAAGAAGCCCATGTCTAACCAACAATGCATGGTCACAGCCGGTGGAAGAACCAAAGTTGACAGCCCAACTGCCCTTGTTTTCCAGAGCTGCTACTTCACTGGGGAGCCTCAACTTGCAAGCTTGAACCCCAAGATTGCTTACTTGGGTCGCCCATGGAGGACTTACTCCAAGGTGGTTATCATGGAATCCATCATTGATGATATCATTGTGCCTGAAGGGTACATGCCATGGATGGGAAGTGCATACAAGGACACGTGTACTTATTATGAGTATAACAATAAGGGACCCG 523 0.4952 MAKNIGFENTAGPGKHQAVALRITADQAVIYNCHMEGFQDTLYVQSQRQFFRDCTITGTVDFIFGDAVGVFQNCKLLVKKPMSNQQCMVTAGGRTKVDSPTALVFQSCYFTGEPQLASLNPKIAYLGRPWRTYSKVVIMESIIDDIIVPEGYMPWMGSAYKDTCTYYEYNNKGP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc36607g00001 174 ProSitePatterns Pectinesterase signature 2. 56 65 IPR033131 -
Stsc36607g00001 174 Gene3D - 1 174 IPR012334 -
Stsc36607g00001 174 PANTHER PECTINESTERASE 1 174 - -
Stsc36607g00001 174 SUPERFAMILY Pectin lyase-like 1 174 IPR011050 -
Stsc36607g00001 174 Pfam Pectinesterase 1 174 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc36607g00001 Stsc-Chr36607 4 526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc36607g00001 2 174 Carbohydrate Esterase AT5G49180 58.523 3.23e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc36607g00001 K01051 - gmx:100800194 306.219