Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc364g00008 ATGGGTGTAAACTCCAACAGAGTTGAGCACTTCGATAGCCATAATAATGGCCAAACCACCACCACCATAAAAATATCAATGCCACCACCACCACCCCTTGAAATCCACAGAGTAGAGCTTCCACCAGAGAGAACCACTCTCCAGAAACTCAGGCAAAGACTCTCTGAAATCTTCTTCCCTGATGACCCTCTCCACCGCTTCAAGAACCAACCATGCTTCAAGAAGCTCCTCTTGGCTCTTCAGTACTTCTTCCCCATTTTCCACTGGGCCCCCAACTACAACATTTCCCTTCTCCGTTCCGACGCCATCTCCGGCCTCACCATTGCTAGCCTCGCCATCCCCCAGGGAATCAGTTATGCAAAGCTTGCAAACCTGCCACCTATTGTTGGATTATATTCAAGCTTTGTACCACCATTGATATATTCACTGCTTGGGAGTTCTAGACATCTTGGTGTTGGACCGGTTTCAATTGCGTCTTTGGTTATGGGATCAATGCTTAGTGAGCAAGTTTCTTACACTCAGCATCCAATTCTGTATCTGAAGTTGGCTTTCACTGCCACTTTCTTTGCTGGTTTATTTCAAGCTTCACTCGGTATATTAAGGTTAGGATTTGTGATTGATTTTCTATCCAAGGCAACACTGTTGGGATTCATGGCGGGTGCAGCCATCATAGTGTCTCTGCAGCAGCTCAAAGGGTTGCTTGGAATAGTGCACTTCACCAACAAGATGCAGATAATTCCGGTTCTGCTTTCTGTTTTCAGGCAAAGACACGAGTGGTCATGGCAAACAATTGTACTCGGATTTGGCTTCTTGGCCTTCTTGCTGACAACAAGACACATAAGCATGAGGAAACCAAAACTATTTTGGGTTTCAGCAGCTGCTCCCTTGACATCAGTTATTCTGTCAACTATTCTAGTCTTTCTTCTCAGAGACAAGGCTCATCAAATTGCAATGATTGGGAACTTACCAAAGGGTCTTAATCCACCATCTTCAAACATGCTATTCTTCAATGGTGCTTACTTGACTCTTGCTATCAAAACTGGCATAGTCACGGGGATCTTATCTCTCACAGAAGGAATTGCAGTAGGTAGGACATTTGCAGCACTGAAGAACTACCAGATTGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAATATAGCTGGTTCATGTTCTTCGTGCTATGTCACAACAGGGTCCTTTTCTCGATCCGCTGTTAACTATAACGCTGGAGCACAAACAGCAGTTTCAAACATAATCATGGCTGCAGCAGTTCTTGTTACCCTTCTATTCCTCATGCCACTCTTCTACTATACCCCAAATGTTGTCTTAGCAGCCATTATCATCACTGCAGTGATTGGCCTGATAGATTATCAAGGTGCACTTAAATTGTGGAAAGTTGACAAACTTGATTTCTTCGCTTGTGTGTGCTCCTTTTTCGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTCGGCATAGCGGTTGCAATATCAGTCTTCAAGATTCTGCTTCATGTTTCTCGACCAAACACTCTGGTTTTGGGGAATATACCTGGAACACAAATATTCCACAACGTAAACCAATACAAAGAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATGTATTTCGCCAATTCAACTTACCTTCAAGAAAGGTTAGTAGAGGATATTTCTATGTTGGTATAA 1707 0.4335 MGVNSNRVEHFDSHNNGQTTTTIKISMPPPPPLEIHRVELPPERTTLQKLRQRLSEIFFPDDPLHRFKNQPCFKKLLLALQYFFPIFHWAPNYNISLLRSDAISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEQVSYTQHPILYLKLAFTATFFAGLFQASLGILRLGFVIDFLSKATLLGFMAGAAIIVSLQQLKGLLGIVHFTNKMQIIPVLLSVFRQRHEWSWQTIVLGFGFLAFLLTTRHISMRKPKLFWVSAAAPLTSVILSTILVFLLRDKAHQIAMIGNLPKGLNPPSSNMLFFNGAYLTLAIKTGIVTGILSLTEGIAVGRTFAALKNYQIDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQGALKLWKVDKLDFFACVCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTQIFHNVNQYKEALRVPSFLILAVESPMYFANSTYLQERLVEDISMLV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc364g00008 568 PANTHER SULFATE TRANSPORTER 48 563 IPR001902 GO:0016020|GO:0055085
Stsc364g00008 568 ProSiteProfiles Caspase family p10 domain profile. 47 85 IPR002138 GO:0004197|GO:0006508
Stsc364g00008 568 Gene3D STAS domain 509 566 IPR036513 -
Stsc364g00008 568 MobiDBLite consensus disorder prediction 1 28 - -
Stsc364g00008 568 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Stsc364g00008 568 Pfam Sulfate permease family 98 477 IPR011547 GO:0016020
Stsc364g00008 568 NCBIfam sulfate permease 85 564 IPR001902 GO:0016020|GO:0055085
Stsc364g00008 568 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc364g00008 Stsc-Chr364 23411 27295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc364g00008 1 562 Inorganic Solute Cotransporters AT3G15990 75.267 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc364g00008 K17471 - gmx:100812617 941.414