Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc364g00007 ATGGGTGTAAACTCCAACAGAGTTGAGCACTTCGATAGCCATAATAATGGCCAAACCACCACCACCATAAAAATATCAATGCCACCACCACCACCCCTTGAAATCCACAGAGTAGAGCTTCCACCAGAGAGAACCACTCTCCAGAAACTCAGGCAAAGACTCTCTGAAATCTTCTTCCCTGATGACCCTCTCCACCGCTTCAAGAACCAACCATGCTTCAAGAAGCTCCTCTTGGCTCTTCAGTACTTCTTCCCCATTTTCCACTGGGCCCCCAACTACAACATTTCCCTTCTCCGTTCCGACGCCATCTCCGGCCTCACCATTGCTAGCCTCGCCATCCCCCAGGGAATCAGTTATGCAAAGCTTGCAAACCTGCCACCTATTGTTGGATTATATTCAAGCTTTGTACCACCATTGATATATTCACTGCTTGGGAGTTCTAGACATCTTGGTGTTGGACCGGTTTCAATTGCGTCTTTGGTTATGGGATCAATGCTTAGTGAGCAAGTTTCTTACACTCAGCATCCAATTCTGTATCTGAAGTTGGCTTTCACTGCCACTTTCTTTGCTGGTTTATTTCAAGCTTCACTCGGTATATTAAGGTTAGGATTTGTGATTGATTTTCTATCCAAGGCAACACTGTTGGGATTCATGGCGGGTGCAGCCATCATAGTGTCTCTGCAGCAGCTCAAAGGGTTGCTTGGAATAGTGCACTTCACCAACAAGATGCAGATAATTCCGGTTCTGCTTTCTGTTTTCAGGCAAAGACACGAGTGGTCATGGCAAACAATTGTACTCGGATTTGGCTTCTTGGCCTTCTTGCTGACAACAAGACACATAAGCATGAGGAAACCAAAACTATTTTGGGTTTCAGCAGCTGCTCCCTTGACATCAGTTATTCTGTCAACTATTCTAGTCTTTCTTCTCAGAGACAAGGCTCATCAAATTGCAATGATTGGGAACTTACCAAAGGGTCTTAATCCACCATCTTCAAACATGCTATTCTTCAATGGTGCTTACTTGACTCTTGCTATCAAAACTGGCATAGTCACGGGGATCTTATCTCTCACAGAAGGAATTGCAGTAGGTAGGACATTTGCAGCACTGAAGAACTACCAGATTGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAATATAGCTGGTTCATGTTCTTCGTGCTATGTCACAACAGGGTCCTTTTCTCGATCCGCTGTTAACTATAACGCTGGAGCACAAACAGCAGTTTCAAACATAATCATGGCTGCAGCAGTTCTTGTTACCCTTCTATTCCTCATGCCACTCTTCTACTATACCCCAAATGTTGTCTTAGCAGCCATTATCATCACTGCAGTGATTGGCCTGATAGATTATCAAGGTGCACTTAAATTGTGGAAAGTTGACAAACTTGATTTCTTCGCTTGTGTGTGCTCCTTTTTCGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTCGGCATAGCGGTTGCAATATCAGTCTTCAAGATTCTGCTTCATGTTTCTCGACCAAACACTCTGGTTTTGGGGAATATACCTGGAACACAAATATTCCACAACGTAAACCAATACAAAGAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATGTATTTCGCCAATTCAACTTACCTTCAAGAAAGGGTTCTGAGATGGGTTCGCGAAGAGGAAGAGTGTACAAAAGCAAATAATACAAGTTCATTGAAGTGCATAATTTTAGACATGACAGCTGTGACAGCCATAGACACAAGTGGTCTTGACACATTATGTGAACTTAGGAAGATGCTGGAGAAAAGATCACTTCAGCTTGTGTTAGCAAATCCTGTTGGGAGTGTGATGGAAAAGTTACATACATCAACAGTTTTGGATTCCTTTGGATTGAAAGGTGTTTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCATCATCCTGGAAAGCTGAGCCTTGA 1983 0.4327 MGVNSNRVEHFDSHNNGQTTTTIKISMPPPPPLEIHRVELPPERTTLQKLRQRLSEIFFPDDPLHRFKNQPCFKKLLLALQYFFPIFHWAPNYNISLLRSDAISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEQVSYTQHPILYLKLAFTATFFAGLFQASLGILRLGFVIDFLSKATLLGFMAGAAIIVSLQQLKGLLGIVHFTNKMQIIPVLLSVFRQRHEWSWQTIVLGFGFLAFLLTTRHISMRKPKLFWVSAAAPLTSVILSTILVFLLRDKAHQIAMIGNLPKGLNPPSSNMLFFNGAYLTLAIKTGIVTGILSLTEGIAVGRTFAALKNYQIDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQGALKLWKVDKLDFFACVCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTQIFHNVNQYKEALRVPSFLILAVESPMYFANSTYLQERVLRWVREEEECTKANNTSSLKCIILDMTAVTAIDTSGLDTLCELRKMLEKRSLQLVLANPVGSVMEKLHTSTVLDSFGLKGVYLTVGEAVADISSSWKAEP 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc364g00007 660 NCBIfam sulfate permease 85 648 IPR001902 GO:0016020|GO:0055085
Stsc364g00007 660 SUPERFAMILY SpoIIaa-like 535 651 IPR036513 -
Stsc364g00007 660 Pfam Sulfate permease family 98 477 IPR011547 GO:0016020
Stsc364g00007 660 Pfam STAS domain 530 648 IPR002645 -
Stsc364g00007 660 ProSiteProfiles Caspase family p10 domain profile. 47 85 IPR002138 GO:0004197|GO:0006508
Stsc364g00007 660 FunFam Sulfate transporter 31 509 655 - -
Stsc364g00007 660 MobiDBLite consensus disorder prediction 1 24 - -
Stsc364g00007 660 ProSiteProfiles STAS domain profile. 529 652 IPR002645 -
Stsc364g00007 660 PANTHER SULFATE TRANSPORTER 48 652 IPR001902 GO:0016020|GO:0055085
Stsc364g00007 660 Gene3D STAS domain 509 654 IPR036513 -
Stsc364g00007 660 MobiDBLite consensus disorder prediction 1 28 - -
Stsc364g00007 660 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Stsc364g00007 660 CDD STAS_SulP_like_sulfate_transporter 530 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc364g00007 Stsc-Chr364 23402 27295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc364g00007 1 659 Inorganic Solute Cotransporters AT3G15990 74.659 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc364g00007 K17471 - gmx:100812617 1103.2