Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc36332g00001 CACATTGGGCAACATAGGAAGCAACTTGTTCAACTACAAGCACCAAATTCTTCTAAGAAACACAAACAACCAAAGAAAATTACTAATAATAATAAAATCAAAGACACTACTACTTCACCATCACCATCATCATATTTTCCCTCTTCATCATTGTCACCAAATCCTGAAAGTTTCTCACCACCAGAAACTCCTTCAAATTCACCTTATTCTTCATCACTACCATTATCCCCTGAAGCTTCTGATTCCCCTTCACCATCTCCATCTCCATCTCCATCCAAACCTTCACCTTCGCCTTCACCGTCAATTCCGGTCAATTCGCCTAGCATCGCGTCGAATTGGATTTCAGTGCCGTCGCCGGCTCCTTTGCCTGCAAACAAAGGGGAATCAAGAAGTTTCTCAAGGCAACACTCTGTGATAGTTTGGTCAACAGTTGGTGGATTCTCATTTTTGGTTTTGGTGTCAGCAATTTTGTTTGCTTGCTTCAGAAGTAATAAAGTTGAGACTGTGAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAAAAAGCATTTGTAACAGGTGTTCCAAGTCTGAAAAGAGCAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCTATACCAGATGGGACTGTTTATAAGGGGACACTCTCCAGTGGAGTTGAGATAGCAGTGGCATATTCTGCAGTTACTTCATCTAAATACTGGTCGAAAAGTATGGAAGCGCAATACCAAAAGAAGATAGAGACGTTGTCAAGGGTGAACCACAAGAATTTTGTGAATCTTATTGGATATTGTGAAGAGAGAAAGCCATTCACAAGGGTGATGGTTTTCGAGTATGCTCCGAATGGAACAT 865 0.415 HIGQHRKQLVQLQAPNSSKKHKQPKKITNNNKIKDTTTSPSPSSYFPSSSLSPNPESFSPPETPSNSPYSSSLPLSPEASDSPSPSPSPSPSKPSPSPSPSIPVNSPSIASNWISVPSPAPLPANKGESRSFSRQHSVIVWSTVGGFSFLVLVSAILFACFRSNKVETVKPWATGLSGQLQKAFVTGVPSLKRAELEVACEYFSNIIGSIPDGTVYKGTLSSGVEIAVAYSAVTSSKYWSKSMEAQYQKKIETLSRVNHKNFVNLIGYCEERKPFTRVMVFEYAPNGT 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc36332g00001 288 FunFam Inactive receptor-like serine/threonine-protein kinase 175 283 - -
Stsc36332g00001 288 PANTHER PROTEIN MALE DISCOVERER 2 26 288 - -
Stsc36332g00001 288 MobiDBLite consensus disorder prediction 63 79 - -
Stsc36332g00001 288 MobiDBLite consensus disorder prediction 80 103 - -
Stsc36332g00001 288 Pfam Protein tyrosine and serine/threonine kinase 205 287 IPR001245 GO:0004672|GO:0006468
Stsc36332g00001 288 MobiDBLite consensus disorder prediction 30 56 - -
Stsc36332g00001 288 Gene3D Phosphorylase Kinase; domain 1 178 283 - -
Stsc36332g00001 288 MobiDBLite consensus disorder prediction 1 104 - -
Stsc36332g00001 288 SUPERFAMILY Protein kinase-like (PK-like) 186 288 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc36332g00001 Stsc-Chr36332 103 1336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc36332g00001 83 288 Receptor kinase-like Gene Family AT5G47850 24.696 8.97e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Stsc36332g00001 PK_Tyr_Ser-Thr 3.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc36332g00001 - - gmx:100801161 290.041