Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc362g00001 ATGAAGAATCTTGTAGGCATCAATTCAAGAGTGGAGGAAGTGATTAATCACATTGGTATTGGATTGGATGATGTTCGTTACATAGGCATATGTGGAATGGGTGGCCTAGGTAAGACAACTATTGCTAGAATAGTATATGAAGCCCTCCAAAGTGAATTTGAAGTTGCTTATTTTCTTGCCAATGTAAGAGAGACATGTGAGAAAAATGGTATTGTTCAAGCACAAAAAGACCTTCTTGTCCATATCAATGGAAGCTCGAGTGAAATTGATTACAAGTATGATGGGAGGAGAATAATTCAGGCTTCTTTGTGTCATAAGAAGGTTCTTCTTGTTCTTGACCATATCAATGGAAGCTCGAGTAATGTTAAAAATGAGTATGATGGGAGGATAACAATTCAGACTTTTTTGCATCGCAAAAAGGTTCTTCTTGTTCTTGACGATATAAATAAAGAAGAACAATTGAAGAATCTGGCCGAAGAGAAAAACTGGTTTGGTTCTGGAAGCAGAGTAATTATCACAACTAGAGACATGCAACTGCTGAAAATACAGGATGCACATGAAATTTACAATGTTGAAACGATGGCAGAAAATGAAGCCTTTGACCTGTTTCGTATGAAGGCTTTTAAACATCGAATGCCTGAAGAAGAGTATTTGGTGGTCAAATACTGTGATGGTCTTCCATTGGCACTTGATGTATTGGGTTCCCATTTTTATGGTAAATCTATTAAAGAATGGCATAGTGCTCTTGGAAAATTAAAGAGCATTCCAAATGCTGACATTTTTGAGAAGCTGAAAATAAGTTATGATGGTTTGGATTTCATGGACCAGGACATTTTTTTAGACATTGCTTGTTATTTCAAAGGATGTTTTAAAGTAAGTGTAACAAATATATTAGAAAAGCGTGGTTATCATGTTGAAATTGGTATCGCTACTTTGATCAATAGATCTCTACTCGCTATAAAAAACAAATGTTCATGTGAGGTGCTGGAGATGCATGATTTGCTTGAAGAAATGGGCAGACATATTACAATTGAAGAATCTCCAAATGATCCTAGCAAGCGCAGCAGGTTGCGGTGTTACGAGGACATTGATCTTGTTCTTACTCAAAACAAGTTTCTGGAAAAGCTGAAGTACGTAATGCTGAATTATTGCTCTCGGCTGAAACAAATACCTGATCTTTCTGAAGCTCCCAATCTTGAAGAACTTTACTTGGATTGTTGTGTTGAACTGAATAATTTTCCGTCATATCTCACACGCCACAAGAGCCTAGTTAAACTTTCTTTAGGGGATTGCTCAAGTCTTGAAACTCTTGGGAGTAAATTGGAAATGAGTTCCCTAAAGGAATTAGATCTTGGCGGTTGCACAAGTTTGAAGAAACTTCCAGAATTTGGAGAATGCATGAGACATTTATCAATTCTTTCTTTGTGGTGTACAGCCATAGAAGAACTACCCATGACGGTTGGATGTCTAGTTGACCTAAAGAAGTTAAACTTGCAAGAATGCAAAAGGCTTACTTGCCTTCCAAACAGCATTCAAGAGTTAAAATCCCTCACAGCTTTTAATCTGAATGGATGCCTAAATCTCCTTCAATCTTGGTATTCTCTCTCTGGACTAACCTTATTGGTTACTTTGAAATTAGTGGCATGTTGTCTCACATCTCAAGAGTCATCGTCTTACAATCTTGGCCACTTAGTATCTTTAATGAATTTGGATTTATCAAGAAACAATTTTGAAAGGGTTCCAATTGATATCCATGAACTCCCCAAGCTTAGATGTCTGAATCTAGATAACTGCCGTCATCTTAAAGTGTTACCAGAGCTTCCATCAAGTATAAGAATGTTAAAAGCACGATATTGTATATCACTGGATCCATGGAATTCGAATGTTATTATATCAAAGGCCTGTTGTGGCTTTGCAGCATCAGCTAAGTATGATCCTCATGAGCTCTTGAAAATGTGTGTGACACAGAAGCAAATAAGGTTGAACATATGGAATGAAATTCCATGGTGGTTTGTCCATCAGGAACAGGGTAATGGAGTATCAGTCACATTGCCACGTAATGAAACCATGGCACTTGCCCTTTGTTTCCAATTGTGCCCAATGCAGAGGACTGAGAATGATATAGCACATTTTTTATATCCTTGGATGATTTGCAACGGTAAAAAAATCATCAAAGAGAGTTTAAATAGGGTAACGTATGAAACTGAATATTCTCAGTATCTCATCCTATGCTTGACTAGTGACCATTTTGTTGACCAATTTTGCCAAGACTATCGCTTAGAACTGGAACTTGATTATTATGTTCGAACGAAAGTACAGAATTCTGGGGCTCGTTGGGTGTTCAAGCAAGACATTCAAGATTTGAATGAAAAAAGTGGAACCAAAACATCAAAAAGAAAAGCAACTTCTGATCTGAACATGAACTGA 2427 0.3717 MKNLVGINSRVEEVINHIGIGLDDVRYIGICGMGGLGKTTIARIVYEALQSEFEVAYFLANVRETCEKNGIVQAQKDLLVHINGSSSEIDYKYDGRRIIQASLCHKKVLLVLDHINGSSSNVKNEYDGRITIQTFLHRKKVLLVLDDINKEEQLKNLAEEKNWFGSGSRVIITTRDMQLLKIQDAHEIYNVETMAENEAFDLFRMKAFKHRMPEEEYLVVKYCDGLPLALDVLGSHFYGKSIKEWHSALGKLKSIPNADIFEKLKISYDGLDFMDQDIFLDIACYFKGCFKVSVTNILEKRGYHVEIGIATLINRSLLAIKNKCSCEVLEMHDLLEEMGRHITIEESPNDPSKRSRLRCYEDIDLVLTQNKFLEKLKYVMLNYCSRLKQIPDLSEAPNLEELYLDCCVELNNFPSYLTRHKSLVKLSLGDCSSLETLGSKLEMSSLKELDLGGCTSLKKLPEFGECMRHLSILSLWCTAIEELPMTVGCLVDLKKLNLQECKRLTCLPNSIQELKSLTAFNLNGCLNLLQSWYSLSGLTLLVTLKLVACCLTSQESSSYNLGHLVSLMNLDLSRNNFERVPIDIHELPKLRCLNLDNCRHLKVLPELPSSIRMLKARYCISLDPWNSNVIISKACCGFAASAKYDPHELLKMCVTQKQIRLNIWNEIPWWFVHQEQGNGVSVTLPRNETMALALCFQLCPMQRTENDIAHFLYPWMICNGKKIIKESLNRVTYETEYSQYLILCLTSDHFVDQFCQDYRLELELDYYVRTKVQNSGARWVFKQDIQDLNEKSGTKTSKRKATSDLNMN 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc362g00001 808 Gene3D - 121 189 IPR027417 -
Stsc362g00001 808 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 117 IPR044974 GO:0006952
Stsc362g00001 808 Pfam NB-ARC domain 128 254 IPR002182 GO:0043531
Stsc362g00001 808 Pfam NB-ARC domain 10 115 IPR002182 GO:0043531
Stsc362g00001 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 282 IPR027417 -
Stsc362g00001 808 Gene3D - 1 120 IPR027417 -
Stsc362g00001 808 Pfam C-JID domain 665 785 IPR045344 -
Stsc362g00001 808 Gene3D - 193 272 IPR042197 -
Stsc362g00001 808 PRINTS Disease resistance protein signature 441 457 - -
Stsc362g00001 808 PRINTS Disease resistance protein signature 223 237 - -
Stsc362g00001 808 PRINTS Disease resistance protein signature 102 116 - -
Stsc362g00001 808 PRINTS Disease resistance protein signature 27 42 - -
Stsc362g00001 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 116 IPR027417 -
Stsc362g00001 808 SUPERFAMILY L domain-like 331 614 - -
Stsc362g00001 808 Gene3D Ribonuclease Inhibitor 357 513 IPR032675 -
Stsc362g00001 808 Gene3D Ribonuclease Inhibitor 514 629 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc362g00001 Stsc-Chr362 2293 5276 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc362g00001 5 622 WRKY Transcription Factor Family AT5G45050 25.702 8.21e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc362g00001 - - ahf:112769348 509.22