Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3623g00001 ATGAAAACAAACAAAAAGGATTTTAACAATAGCAAAATTATTAGTCCAGAACAGCTGCAAAGAAAACTCTTATTTGATGTGGTTAATGACATTCTTGTTCAAAAATCATTCCTAGAGAGTTCTTGGACTCCGTTGTTCCTAACAAACCAGCTACCAAGTGGAAACCTACGGGGAAAGCAGCTTTTGGATCAGGTATGCACAGAAATAGACCAGTTACAACCTCAGAAAAAGAGTCTTGACCTGGCCTTTGACGATGAGAATTTGACAAGTCTCTTATTGGGAGATTCAAATTTGATACATCACCCCACAGTTTGGACTAACAGCAGCATCGAGATACCAAATGTTGTGTTGGACATAGAAAGGTTGATCTTTAAAGATTTGATTACTGAAGTTGTTAAAGGAGAATTAGCAAACAATGCCG 421 0.3753 MKTNKKDFNNSKIISPEQLQRKLLFDVVNDILVQKSFLESSWTPLFLTNQLPSGNLRGKQLLDQVCTEIDQLQPQKKSLDLAFDDENLTSLLLGDSNLIHHPTVWTNSSIEIPNVVLDIERLIFKDLITEVVKGELANNA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3623g00001 140 PANTHER LONGIFOLIA PROTEIN 7 138 IPR033334 GO:0051513
Stsc3623g00001 140 Pfam Domain of unknown function (DUF4378) 11 130 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3623g00001 Stsc-Chr3623 988 1408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3623g00001 17 137 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 41.270 1.15e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3623g00001 - - adu:107486612 236.113