Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc357g00003 | ATGAGAACCAAGACACGTGGCGGACGTAAAAAGCTTTCGCCCTCTGCAGATCCTCCTTCTCCGATCACCAACCAGGATGAATCTTGTGCAACTGAGTCGGAGACATCACGAGGGGGTGGTGGTGATGATGCGAAAGATGTTCCGATGGTCGATTGCATGGATCAGCATTACAATGAAAGTCACCTTGATGTTCTCGGCTGTGAACATGAAGAATACTGTGCAACTGCATTTGAGACATCGCATGGAGGTAGTGATGATAACGTGAAAGATGTTCCCACGGTCAATTGCATTGAGCAGCATTACAACGATAATTCCGTTGATATTCCCGATTGTGAGTATATTGATTTTCTAGACAAGAGTATTTGCTTATGCTGCAATAAACGTGGAGGAGTGTTAGCTTGTAGCGGAAGTGGTTGCCCTGTGGGTCTTCATCCCAAGTGTATCAACTCCGAGCCTAAGTTTGATGATTCTGGTAAGTTCTACTGCCCTTATTGCTGGTATAAACGGAATGTCAATATGAATCCAGAGATGAGCAAAAGGATCTTCACAGCAAAGAATGCTTTGTTAAGATTAGCGGATCAAGATGTGGTTATGAATGATAGATTGGTGAAGACCTTAAAGGCTCCTAAGGGGAAAGAACCTGATGATGGAGGTGGGATCCCATTAAGCAGTGATGGTAGGCAGAGAATGGATGAAGTCGGTGCTCACCCTGTGCAGCCCAAGGTTGACCTACCAATAAAATTGCAAAAGGATGCTAGTGTTCAATGTGACATAGCACTTGAAGATCAAGCTTATTCAAACGGTGATTTCAGATCTTGTGGGGAAGAAGTTATGCCAGTAGATATTAATCCGGTTGAGGGTTCTTTGGAACTGAAAGAAAGCTTTGAAACAGGTGACTCAAGACTAAATAAGGAGGATGTACATGAAAGAATTGTTGATGTTGGAGAGAAAGAAGAACCTGTGGCTGCTTTGCATTTGGGAAAGCATATTGAAGGACATTCACATGATATAGAATTTGTCCAAGGGACGCAGGAAAGTGTTCTTAAATCTGGAGAAAAGGGCAGGAAGACTGGCAAAGGAAAGATTCCCGGTAAAGAAAACAAGCTATCTGCAACAGGTAGTTCTGTGAGTGAAACTAATAATTCAGATTCTGATGCCATCTCAGAGAGAAGACGCTGTAGCAAAAGGAAGATCCAAAGGACAGAATTTCCTCAGGATGTTCACAGGAAATCATTATTACAGGGGCATAACATCAAAGAGGAAGAGGCCAATGACATAGATGAGGAAGTTACCAGCTACAGACTCCGAAGGAGATCACAGAGTTCACAAAAGCAAGACATGAAAAAACTTCCATTGACAGTGAGGCGTAAGGCATTAATTTGGACTTCTGAAGAAGAAAAAGTTCTGCAGGAAGGAGTGTTAAGGTTCTCAAAGGGAAATCAGAATATCCCCTGGAGTAGAATTTTAGACTTTGGTCGTCATGTGTTTGACAAGACCCGTACACCTGTCGACCTTAAAGACAAGTGGAGAAATATCAAGAAAGCGTGGGATACTGAAACTTCACAAGTATCTCTTTGCCTCTAA | 1584 | 0.4268 | MRTKTRGGRKKLSPSADPPSPITNQDESCATESETSRGGGGDDAKDVPMVDCMDQHYNESHLDVLGCEHEEYCATAFETSHGGSDDNVKDVPTVNCIEQHYNDNSVDIPDCEYIDFLDKSICLCCNKRGGVLACSGSGCPVGLHPKCINSEPKFDDSGKFYCPYCWYKRNVNMNPEMSKRIFTAKNALLRLADQDVVMNDRLVKTLKAPKGKEPDDGGGIPLSSDGRQRMDEVGAHPVQPKVDLPIKLQKDASVQCDIALEDQAYSNGDFRSCGEEVMPVDINPVEGSLELKESFETGDSRLNKEDVHERIVDVGEKEEPVAALHLGKHIEGHSHDIEFVQGTQESVLKSGEKGRKTGKGKIPGKENKLSATGSSVSETNNSDSDAISERRRCSKRKIQRTEFPQDVHRKSLLQGHNIKEEEANDIDEEVTSYRLRRRSQSSQKQDMKKLPLTVRRKALIWTSEEEKVLQEGVLRFSKGNQNIPWSRILDFGRHVFDKTRTPVDLKDKWRNIKKAWDTETSQVSLCL | 527 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc357g00003 | 527 | CDD | SANT_TRF | 461 | 514 | - | - | |
Stsc357g00003 | 527 | ProSitePatterns | Zinc finger PHD-type signature. | 122 | 165 | IPR019786 | - | |
Stsc357g00003 | 527 | MobiDBLite | consensus disorder prediction | 208 | 228 | - | - | |
Stsc357g00003 | 527 | ProSiteProfiles | Myb-like domain profile. | 461 | 513 | IPR001005 | - | |
Stsc357g00003 | 527 | MobiDBLite | consensus disorder prediction | 384 | 425 | - | - | |
Stsc357g00003 | 527 | MobiDBLite | consensus disorder prediction | 17 | 35 | - | - | |
Stsc357g00003 | 527 | SUPERFAMILY | FYVE/PHD zinc finger | 119 | 173 | IPR011011 | - | |
Stsc357g00003 | 527 | MobiDBLite | consensus disorder prediction | 349 | 363 | - | - | |
Stsc357g00003 | 527 | MobiDBLite | consensus disorder prediction | 345 | 425 | - | - | |
Stsc357g00003 | 527 | SMART | sant | 457 | 515 | IPR001005 | - | |
Stsc357g00003 | 527 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 118 | 201 | IPR013083 | - | |
Stsc357g00003 | 527 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Stsc357g00003 | 527 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 95 | 515 | - | - | |
Stsc357g00003 | 527 | Gene3D | - | 461 | 524 | - | - | |
Stsc357g00003 | 527 | SUPERFAMILY | Homeodomain-like | 461 | 514 | IPR009057 | - | |
Stsc357g00003 | 527 | MobiDBLite | consensus disorder prediction | 368 | 383 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc357g00003 | Stsc-Chr357 | 12604 | 17416 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc357g00003 | 459 | 512 | Single Myb Histone (SMH) Gene Family | AT3G49850 | 49.091 | 7.43e-06 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc357g00003 | - | - | aip:107605217 | 792.341 |