Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3550g00001 ATGAAGTATACTTCCTGTTGGCAGTTCGGTGCGAGAGAATACACATGGCGAGGTGGACGAGCAAATTGCGACAAATTTGAGGCTGAAATGTCTGTTGAGATGTTCCTCCCATTGCATGCCGATCGCCATTGCATCATCTCAGTTATTTCTTCCACTGAATCGCTTCTTGAAGGACATCTTCATAAACTAGGCTTGTACCCTCATCGCACCCTTCACTCTCTAGCCAAAACATATGGCCCCTTGATGCTGCTCCATTTTGGGAAGGTGCCAGTTCTTGTGGTTTCATCTGCTGAAGGTGCACGTGACATCATGAAAACCCATGATCGTGTATTTGCAAGCAGACCCCAAAGTAAACTCTATGATATACTTCTATACAGTCCCAAAGATATATCAACAGCACCATATGGTGAGTACTGGAGGCAAGTAAGGAGCATCAGCATCTTGCATCTGCTTAGTGCCAAAAAGGTTCAATCATTTCGTGCCGTCAGATGGGAGGAAACTGCCATAATGATAGAAAAGATACGGCACTCTTCTTCCCCTTTGTCCTCCTCACAGGTGAATATGAGCGAGTTGTTGCGGAAACGTGGATAA 591 0.4535 MKYTSCWQFGAREYTWRGGRANCDKFEAEMSVEMFLPLHADRHCIISVISSTESLLEGHLHKLGLYPHRTLHSLAKTYGPLMLLHFGKVPVLVVSSAEGARDIMKTHDRVFASRPQSKLYDILLYSPKDISTAPYGEYWRQVRSISILHLLSAKKVQSFRAVRWEETAIMIEKIRHSSSPLSSSQVNMSELLRKRG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3550g00001 196 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 57 192 - -
Stsc3550g00001 196 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc3550g00001 196 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc3550g00001 196 Pfam Cytochrome P450 58 192 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc3550g00001 196 SUPERFAMILY Cytochrome P450 57 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc3550g00001 196 Gene3D Cytochrome P450 46 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3550g00001 Stsc-Chr3550 1486 3585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3550g00001 56 192 Cytochrome P450 AT3G48320 64.234 6.08e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3550g00001 - - gmx:100806940 183.341