Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc35314g00001 ATGGAAAACGTGCTCAAAACTTCTCTAGAGCTTAGTAGCAATGCTTTGGACATGATCAATGGTGTGAGCAAGGTCCTCGGGCAATTCGACTTTAGCACGCTAGCAGGCGGCGGTGGCGGCGGCTGCAATACTCAGAGGAGGCTTCTGGAAGAAGAATCGTCCAATTTATTAAAAGATGGGATGCCTTCTTGGGTGAATGAAGGGCAAAGGAAGCTGATCCAGGCGGGTCTGGTGGGCGGAGTCGGAAGCATTGTGCCTAATGCAGTTGTGGCTAAGGATGGGAGTGGACAGTTTAAGACATTGACGGATGCCCTTAAATTGGTGCCAAAGAAGAACAAGACTCCGTTCATAATTTATGTTAAGGCTGGTGTGAATGCTGCAAACTTCATGGCGAAGAACATTGGATTCGAGAACACAGCAGGCCCAGGAAAGCACCAAGCAGTGGCACTCAGAATCACAGTAGACCAAGCCGTGATCTACAACTGCCACATGGAAGTTGGAGTCTTCCAAAACTACAAGCTCCTTGTCAAGAAGCCCATGTCTAACCAACAATGCATGGTCACAGCCGGTGGAAGAACCAAAGTTGACAGCCTAACTGCCCTTATTTTCCAGAGCTGCTACTTCACTAGGGAGCCTCAACTTGCAAGCTTGAACCCCAAGATTGCTTACTTGGGTCGCCCATGGAGGACTTACTCCAAGGTGGTTATCATGGACTCCATCATCGATGATATCATTGTGCCTGAAGGGTACATGCCATGGATGGGAAGTGCATACAAGGACACGTGTACTTATTATGAGTATAACAATAAGGGACCCGGTGCTGATACCTCAAAGAGGGTTAAGTGGCCTGGGTTTAAGGTCTTGGATGCTCCTGAAGCTGCTAATTATTATCCACGCAAATTCTATGAGCTTTCTAACTCTACTGATCGTGATGGTTGGATCATTGACTCTGGTGTTCCTTATAATCTTGATGCCTTCCCTGCCTCCACTTCC 993 0.4773 MENVLKTSLELSSNALDMINGVSKVLGQFDFSTLAGGGGGGCNTQRRLLEEESSNLLKDGMPSWVNEGQRKLIQAGLVGGVGSIVPNAVVAKDGSGQFKTLTDALKLVPKKNKTPFIIYVKAGVNAANFMAKNIGFENTAGPGKHQAVALRITVDQAVIYNCHMEVGVFQNYKLLVKKPMSNQQCMVTAGGRTKVDSLTALIFQSCYFTREPQLASLNPKIAYLGRPWRTYSKVVIMDSIIDDIIVPEGYMPWMGSAYKDTCTYYEYNNKGPGADTSKRVKWPGFKVLDAPEAANYYPRKFYELSNSTDRDGWIIDSGVPYNLDAFPASTS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc35314g00001 331 PANTHER PECTINESTERASE 124 165 - -
Stsc35314g00001 331 Gene3D - 62 123 IPR012334 -
Stsc35314g00001 331 Gene3D - 167 326 IPR012334 -
Stsc35314g00001 331 Pfam Pectinesterase 167 301 IPR000070 GO:0030599|GO:0042545
Stsc35314g00001 331 Pfam Pectinesterase 125 165 IPR000070 GO:0030599|GO:0042545
Stsc35314g00001 331 SUPERFAMILY Pectin lyase-like 87 312 IPR011050 -
Stsc35314g00001 331 Gene3D - 124 166 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc35314g00001 Stsc-Chr35314 11 1880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc35314g00001 1 321 Carbohydrate Esterase AT5G49180 36.816 7.72e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc35314g00001 K01051 - gmx:100784682 380.563