Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc351g00005 ATGTCTTCCACCTCCTCCTCCTCTTCCTCTTCCATTTCTGATGAACAAGAACAAGAACAAGGCACTGACATAGACGACAACTCAACCGACCAACCATGTCCTCAAAACGACATTCTCAACGATCAAAACGACAATAACAACAATGGCCAAGCAAACGAGGCCGAAAATGATGAGGATTTTCTTAGCTCATGCGACGGCCGGGACGACAAAATTCCCATTGCTCTTGCGGTTCCCGCCACCGCCACCACCGGACCCTCTCCGATCCCTACCGTCACGGTGGCGTTTACCACCTCTGACGATAGAATTCCCGTCTCAGCCGCAGCCGCAGCCACCAGCATCGTGACACAGCCGAAAAGGCGGCGTGCCGTGAACTATGCAGGCATGATGAAGCAATACCAGAGGCTTTGGACGAAGCAGGACGAGATAGAACTCTTGAGAGGGTACCTTGAACACGTTAGAAGAAACAAAGGCACAAGAAAGTCCCTCCAAAACGACGTAGCTTTGTTCTACGGTGACGTGTGCCACAAGCTAAATACGGATTTCAACAAGAACCAGCTTGTTGAGAAGCTGAGGAGGCTAAAACGGAAACACAAGGTGACTTTGGATAAGGGCAATTCGGGGAAACTCTCCTTCAAGAACCCTCAGGACGAGGGCATTTTCGACATTTCGCACAAGATATGGGGCAATGACATTGACGCTGAACAATTAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGCGTTGGATCTTGATGGTGGCGGCGTTGATGGTGATCACGGCAAGGAGAAGGTGAAAATCGAGGAGGTTGTGATTCGTGATGAGATTGAAGAAAGCATTCCGAAGCGGCCGCGGTTAATCGAAAACGAGGTGGAATCTGCTGCTGAATTGCAGATCGAGAGCTTGATTCAAGAAACTACGAGATCTTGTTTCCCACCATTGATGAAGGAATTGTTGGAAGATGAAGGAGGGCTGAAGCCGGTAGAGTTGTGCCCTGGGGTTGGAGAAGAGCGAGGTGAGGAATGGAGGAAGAAGATGATTTCAGAGCTGGAAACGTATTTGAATCGGTTAGAGTTGTTGCAGGATCAGATAAAGGCTAAATTAGAAGAGCTTAGGTCTGGTTCAAGGGATTGA 1143 0.4856 MSSTSSSSSSSISDEQEQEQGTDIDDNSTDQPCPQNDILNDQNDNNNNGQANEAENDEDFLSSCDGRDDKIPIALAVPATATTGPSPIPTVTVAFTTSDDRIPVSAAAAATSIVTQPKRRRAVNYAGMMKQYQRLWTKQDEIELLRGYLEHVRRNKGTRKSLQNDVALFYGDVCHKLNTDFNKNQLVEKLRRLKRKHKVTLDKGNSGKLSFKNPQDEGIFDISHKIWGNDIDAEQLDEEEEEEEEEEEEEALDLDGGGVDGDHGKEKVKIEEVVIRDEIEESIPKRPRLIENEVESAAELQIESLIQETTRSCFPPLMKELLEDEGGLKPVELCPGVGEERGEEWRKKMISELETYLNRLELLQDQIKAKLEELRSGSRD 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc351g00005 380 MobiDBLite consensus disorder prediction 25 57 - -
Stsc351g00005 380 MobiDBLite consensus disorder prediction 1 65 - -
Stsc351g00005 380 MobiDBLite consensus disorder prediction 1 17 - -
Stsc351g00005 380 MobiDBLite consensus disorder prediction 235 263 - -
Stsc351g00005 380 Pfam Protein of unknown function, DUF573 133 228 IPR007592 GO:0006355
Stsc351g00005 380 PANTHER BNAANNG10740D PROTEIN-RELATED 4 373 IPR007592 GO:0006355
Stsc351g00005 380 Coils Coil 229 253 - -
Stsc351g00005 380 Coils Coil 346 377 - -
Stsc351g00005 380 Coils Coil 183 203 - -
Stsc351g00005 380 MobiDBLite consensus disorder prediction 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc351g00005 Stsc-Chr351 44995 46137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc351g00005 130 376 GeBP Transcription Factor Family AT5G28040 35.410 8.92e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Stsc351g00005 DUF573 1.9e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc351g00005 - - ahf:112775206 450.284