Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc350g00002 ATGGATTCTAATAGGGATCAGCATCCAGAGGGTGTTTTTGTTTTTAATCTCCACCAAGATCATGGGGTAAACTTTTCAACCCGGAGAGGATTATTTAGGAAACTCAAATCCGGGTTGAAAGAAACGTTCTTTCCTGATGATCCCTTCCGTCAGTTCAAGAACGAGAAGAGAACATCAAGAAGGTTAGTGAAAGGGATTCAATACTTTGTTCCAATATTCGAGTGGCTTCCGAATTACTCGGCGCGGCTGTTTTGGTCGGATTTGATTGCCGGACTCACCATAACGAGCCTGGCCATCCCTCAGGGGATTAGTTATGCCAAACTCGCCAACCTTCCTCCCGTCATTGGTCTTTATTCAAGCTTTGTCCCACCATTAGTGTATGCTATATTTGGAAGCTCAAGACATGTGGCGGTGGGGACTATAGCGGCAGCATCATTGCTAGTTGGTCAAACTATTCAAACCGTGGCTGACCCAATTCAAGAACCTACCTTGTTCCTTCACTTGGTCTTCACAACCACCTTTGTCACCGGTTTATTCCAAGCCTCTCTTGGTCTTTTCAGGCTTGGGATATTGGTTGATTTCTTTTCCCATTCTACCATCACTGGATTCATGGGTGGAACAGCAGTCATCCTCATCCTCCAACAACTAAAGGGTATTTTTGGAATGAAGCATTTTTCCACCAAAACAAATGTTGTATCAGTGATCAAGGGCATCATTGACAACAGACATGAGATAAGGTGGGAAACCACTGTTCTCGGCGTGATCTTCGTTGTTTTTCTCCAATTTACCGTGCTTGTGAGAGAGAAAAAGCCAAAGCTATTTTGGGTATCAGCTATAGCTCCAATGACAACGGTGGTAGTTGCTGGAGTTTTCACGTATCTGGTTAAGGGCCAAAATCATGGAATACAAATTGTGGGGCATTTACAAAAAGGAATAAACCCTTTGTCCATTCGTTATTTCAACTTTGATGCTAAATATTTACCAGCTGTGCTTCGAGCTGGCATTATCACAGGCATTTTGTCATTAGCGGAAGGAATAGCAATAGGAAGAAGCTTTTCTGTAACTGAAAATACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGCTTTATGAACTTATGTGGTTCTTTCACCTCATGTTACTTGACTAGTGGACCATTTTCTAAAACGGCAGTGAATTACAACGCAGGGTGTAAGACAGCAATGGCAAACGTGGTGCAGGGAGTGTTAATGGCGTTAACACTCTTGTTTCTGGCACCATTATTTGGATACACTCCTCTTGTTGCTCTCTCTTCAATTATCATATCTGCCATGCTTGGACTCATCAAATATGCTGTCTTTATTCATCTCTTCAAAGTTGACAAGTTTGACTTTCTTATTTGCATGGCTGCCTTCTTAGGAGTCATTTTTCTTACCATGGATGAGGGCCTTCTCATCTCTATTGCACTGAGCATTGTAAGAGCACTGTTATATGTGGCTAGGCCTGCCACATGCAAGCTTGGAAAGTTAGATGACTCATCAGCTTCTTATAGAGATGTTGATCAATACACTGCTGCTACAACGTTCCCAGGAGTTTTGATTATTCAACTTGGTTCCCCCATTTACTTTGCAAATGCTATCTATGTCAAAGAAAGGATTATGAGGTACGTTAGAAGTGAGCAAGGCTCTGGTGAAGTTGTGGAGCAGATCATACTTGATTTCTCAGGAGTGACATCAATTGACATGACTGGTATCGAAGGATTGATAGAAATTTATAGAGTATTAGAAAAGAATGGAATTCGGATGTTATTAGTGAACCCAAGACTTGAGGTTATGGAAAAGCTGGTGGCATCTCATTTTGTAGACAAGGTTGGGAAGGATTCATTCTATCTGAATTTGGATGATGCAGTGAATGCAGCTCAATATTCACTTCATTTGCTCAAGACAAATGGCAATAATATTAATGAAGACACAACTACTCATCAACAAGGAAACGGCGATCATGCCTAA 1992 0.4152 MDSNRDQHPEGVFVFNLHQDHGVNFSTRRGLFRKLKSGLKETFFPDDPFRQFKNEKRTSRRLVKGIQYFVPIFEWLPNYSARLFWSDLIAGLTITSLAIPQGISYAKLANLPPVIGLYSSFVPPLVYAIFGSSRHVAVGTIAAASLLVGQTIQTVADPIQEPTLFLHLVFTTTFVTGLFQASLGLFRLGILVDFFSHSTITGFMGGTAVILILQQLKGIFGMKHFSTKTNVVSVIKGIIDNRHEIRWETTVLGVIFVVFLQFTVLVREKKPKLFWVSAIAPMTTVVVAGVFTYLVKGQNHGIQIVGHLQKGINPLSIRYFNFDAKYLPAVLRAGIITGILSLAEGIAIGRSFSVTENTPHDGNKEMIAFGFMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVVQGVLMALTLLFLAPLFGYTPLVALSSIIISAMLGLIKYAVFIHLFKVDKFDFLICMAAFLGVIFLTMDEGLLISIALSIVRALLYVARPATCKLGKLDDSSASYRDVDQYTAATTFPGVLIIQLGSPIYFANAIYVKERIMRYVRSEQGSGEVVEQIILDFSGVTSIDMTGIEGLIEIYRVLEKNGIRMLLVNPRLEVMEKLVASHFVDKVGKDSFYLNLDDAVNAAQYSLHLLKTNGNNINEDTTTHQQGNGDHA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc350g00002 663 Pfam Sulfate permease family 84 465 IPR011547 GO:0016020
Stsc350g00002 663 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Stsc350g00002 663 Gene3D STAS domain 495 637 IPR036513 -
Stsc350g00002 663 CDD STAS_SulP_like_sulfate_transporter 517 627 - -
Stsc350g00002 663 Pfam STAS domain 518 630 IPR002645 -
Stsc350g00002 663 NCBIfam sulfate permease 71 630 IPR001902 GO:0016020|GO:0055085
Stsc350g00002 663 ProSiteProfiles STAS domain profile. 516 634 IPR002645 -
Stsc350g00002 663 PANTHER SULFATE TRANSPORTER 32 636 IPR001902 GO:0016020|GO:0055085
Stsc350g00002 663 SUPERFAMILY SpoIIaa-like 521 634 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc350g00002 Stsc-Chr350 36722 43916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc350g00002 19 642 Inorganic Solute Cotransporters AT5G19600 61.342 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc350g00002 K17471 - gmx:100789107 900.197