Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc34g00019 ATGAACAATCATGACAACAATGCTGATATGGACGAAGATGATGATAGTTTTGAGGTGTTGGATCCTTCATGTTGCTTTCTATGTGATCAAGAGCACAAGACAATTGAAAGCTTCATGGTTCACATGCACAAACACCATGGATTCTTCGTTCCAGATGTTGAATATTTGAAGGATCCAAAATGCCTTCTAACTTATCTTGGGCTTAAGGTCAAAACGGACTTCATGTGTCTTTACTGCAACGACCGATGTTACCCTTTCAGTAGCTTGGAAGCAGTGAGGAAGCATTTGGAAGCTAAAAGTCACTGTAAAGTGCATTATGGTGATGGTGATGAAGAAGAACAGGAGTTAGAAGAATTCTACGATTATAGTAGCAGTTATGTGGACGAGCAAGGCAAGCAGCTGGTTGTATCAATGGATTGA 420 0.4024 MNNHDNNADMDEDDDSFEVLDPSCCFLCDQEHKTIESFMVHMHKHHGFFVPDVEYLKDPKCLLTYLGLKVKTDFMCLYCNDRCYPFSSLEAVRKHLEAKSHCKVHYGDGDEEEQELEEFYDYSSSYVDEQGKQLVVSMD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc34g00019 139 SUPERFAMILY beta-beta-alpha zinc fingers 11 85 IPR036236 -
Stsc34g00019 139 PANTHER ZINC FINGER PROTEIN 622 6 136 IPR040025 -
Stsc34g00019 139 Pfam C2H2 type zinc-finger (2 copies) 25 125 IPR041661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc34g00019 Stsc-Chr34 167564 168193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc34g00019 20 137 C2H2 Transcription Factor Family AT2G24500 75.630 4.66e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc34g00019 K14816 - gmx:100809681 231.876