LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc34g00010	ATGATGAGTTCTCATCAGATTCTATTTCACCTTGCTAATTTCTTTGTTCTGCAGCTCCTGGCTAGTAATTGTTATGCTCAACTTCGCGTAGATTATTACCGGGAAACCTGCCCAGATGTGGAATCAATTGTTCGCACCGCCGTTGAGACGAAACTTCAGCAGACATTTGTTACAGCACCGGGCACACTGAGGTTATTTTTCCATGATTGTTTTGTTCGGGGATGTGATGCTTCAGTTATGCTGGCTTCAAGAAACGGCAGTGCTGAGAAGGATAATGCTATAAATTTGTCACTGGCTGGTGACGGTTTTGATACGGTTATCAAAGCCAAAGCTGCCTTGGATAGTGTACCTCGCTGCCAAAATAAGGTTTCTTGTGCTGATATTTTAGCAATGGCTGCTAGGGACGTTGTTGCATTGACAGGAGGACCATCTTATGAAGTTGAGTTAGGAAGATTAGATGGGAGAATCACTACAAAAGCTAGTGTGAGACACCATCTACCTCATGCTGATTTCACACTAACACAGCTTAATCACATGTTTGCTTCAAATGGACTCACCCTTACAGATCTTGTTGCATTATCAGGAGCACATACTATTGGTTTCTCTCACTGCAGCCAATTCTCCAAAAGAATCTACAACTTCAGAACCAAGAACAGAATTGATCCAACACTGAATCCGGAATATGCAAAACAACTCCGGCGAGTGTGTCCGAAAGATGTTGACCCCAGGATTGCCATAGACATGGATCCAACTACACCTAGAACATTTGATAACCAGTATTACAAGAATCTCCAACAAGGAAAAGGTCTTCTTTCTTCTGACCAGACTTTGTTCACTGATAAAAGATCAAGAAGGCTTGTGAACTTGTTCGCATCGAACGGGACGGAATTCGAACGGGCTTTTGTGGTTGCTGTGAGGAAGCTTGGAAGGATTGGGATCAGAACAGGGAACCAGGGAGAAATCAGGCGTGATTGCACTATGATTAACTAA	990	0.4313	MMSSHQILFHLANFFVLQLLASNCYAQLRVDYYRETCPDVESIVRTAVETKLQQTFVTAPGTLRLFFHDCFVRGCDASVMLASRNGSAEKDNAINLSLAGDGFDTVIKAKAALDSVPRCQNKVSCADILAMAARDVVALTGGPSYEVELGRLDGRITTKASVRHHLPHADFTLTQLNHMFASNGLTLTDLVALSGAHTIGFSHCSQFSKRIYNFRTKNRIDPTLNPEYAKQLRRVCPKDVDPRIAIDMDPTTPRTFDNQYYKNLQQGKGLLSSDQTLFTDKRSRRLVNLFASNGTEFERAFVVAVRKLGRIGIRTGNQGEIRRDCTMIN	329

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc34g00010	329	CDD	secretory_peroxidase	27	325	IPR033905	GO:0004601\|GO:0042744
	Stsc34g00010	329	ProSiteProfiles	Plant heme peroxidase family profile.	27	329	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc34g00010	329	FunFam	Peroxidase	167	308	-	-
	Stsc34g00010	329	Gene3D	-	31	329	-	-
	Stsc34g00010	329	ProSitePatterns	Peroxidases active site signature.	59	70	IPR019794	GO:0004601
	Stsc34g00010	329	PRINTS	Plant peroxidase signature	263	280	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc34g00010	329	PRINTS	Plant peroxidase signature	303	316	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc34g00010	329	PRINTS	Plant peroxidase signature	247	262	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc34g00010	329	PRINTS	Plant peroxidase signature	37	56	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc34g00010	329	PRINTS	Plant peroxidase signature	141	156	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc34g00010	Stsc-Chr34	80894	84391	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc34g00010	15	329	Peroxidase	AT2G18980	65.079	9.32e-154	432

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc34g00010	K00430		-	gmx:100793327	533.872

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