Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc34868g00001 ATGTATGTTCAGGTAGATGACACCCTAGGTGTATTTCACACACACGCAGTAGCTGGCCTATTGGGTGGGCTCCTCACAGGTCTCTTCGCAGAACCAACGCTTTGCAACCTGCTATTACCGGTAACCAATTCTAGAGGTGCATTCTACGGTGGTAGTGGTGGGGTTCAGTTCCTAAAACAAATTGTTGCAGCAATGTTCATAATTGGTTGGAACTTGGTCTCAACCACCATAATTCTTCTTGTGATTCGATTGTTCATACCTTTGAGGATGCCCGATGAGCAGCTTGAGATTGGTGACGATGCTGTTCATGGTGAAGAAGCTTATGCACTTTGGGGTGATGGTGAAAAATATGATCCAACAAGGCATGGGACACAACATCATCATAATGGCAATTCTTCTGTTTCACCTTATGTTAGTGGTGCAAGAGGTGTCACCATCAATTTGTGA 447 0.4452 MYVQVDDTLGVFHTHAVAGLLGGLLTGLFAEPTLCNLLLPVTNSRGAFYGGSGGVQFLKQIVAAMFIIGWNLVSTTIILLVIRLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGTQHHHNGNSSVSPYVSGARGVTINL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc34868g00001 148 MobiDBLite consensus disorder prediction 119 138 - -
Stsc34868g00001 148 Pfam Ammonium Transporter Family 3 108 IPR024041 GO:0008519|GO:0016020|GO:0072488
Stsc34868g00001 148 Gene3D Ammonium transporter AmtB like domains 1 111 IPR029020 -
Stsc34868g00001 148 SUPERFAMILY Ammonium transporter 3 90 - -
Stsc34868g00001 148 PANTHER AMMONIUM TRANSPORTER MEP2 3 120 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc34868g00001 Stsc-Chr34868 1704 2260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc34868g00001 4 148 Inorganic Solute Cotransporters AT2G38290 67.586 1.26e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc34868g00001 K03320 - gmx:100790119 242.662